Matthias Mann

Matthias Mann

Professor, head of research, Professor


  1. 1994
  2. Published

    Error-tolerant identification of peptides in sequence databases by peptide sequence tags

    Mann, Matthias & Wilm, M., 15 Dec 1994, In: Analytical Chemistry. 66, 24, p. 4390-9 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 1996
  4. Published

    Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry

    Wilm, M., Shevchenko, A., Houthaeve, T., Breit, S., Schweigerer, L., Fotsis, T. & Mann, Matthias, 1 Feb 1996, In: Nature. 379, 6564, p. 466-9 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 1997
  6. Identification of a novel membrane protein that interacts specifically with the upar-prourokinase complex

    Behrendt, Niels, Engelholm, Lars Henning, Jensen, O. N., Mörtz, E., Ranne, E., Mann, Matthias & Dan, K., 1997, In: Fibrinolysis and Proteolysis. 11, Supl. 3, p. 10 1 p.

    Research output: Contribution to journalConference abstract in journalResearch

  7. 2000
  8. A urokinase receptor-associated protein with specific collagen binding properties

    Behrendt, Niels, Jensen, O. N., Engelholm, Lars Henning, Mørtz, E., Mann, Matthias & Danø, K., 2000, In: The Journal of Biological Chemistry. 275, 3, p. 1993-2002 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. 2003
  10. Signaling initiated by overexpression of the fibroblast growth factor receptor-1 investigated by mass spectrometry

    Hinsby, A. M., Olsen, Jesper Velgaard, Bennett, K. L. & Mann, Matthias, 2003, In: Molecular and Cellular Proteomics. 2, 1, p. 29-36 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria

    Mootha, V. K., Bunkenborg, J., Olsen, Jesper Velgaard, Hjerrild, M., Wisniewski, J. R., Stahl, E., Bolouri, M. S., Ray, H. N., Sihag, S., Kamal, M., Patterson, N., Lander, E. S. & Mann, Matthias, 2003, In: Cell. 115, 5, p. 629-40 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. 2004
  13. Tyrosine phosphoproteomics of fibroblast growth factor signaling: a role for insulin receptor substrate-4

    Hinsby, A. M., Olsen, Jesper Velgaard & Mann, Matthias, 2004, In: Journal of Biological Chemistry. 279, 45, p. 46438-47 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. HysTag--a novel proteomic quantification tool applied to differential display analysis of membrane proteins from distinct areas of mouse brain

    Olsen, Jesper Velgaard, Andersen, J. R., Nielsen, P. A., Nielsen, Michael Lund, Figeys, D., Mann, Matthias & Wisniewski, J. R., Jan 2004, In: Molecular and Cellular Proteomics. 3, 1, p. 82-92 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

    Olsen, Jesper Velgaard & Mann, Matthias, 2004, In: Proceedings of the National Academy of Science of the United States of America. 101, 37, p. 13417-22 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Trypsin cleaves exclusively C-terminal to arginine and lysine residues

    Olsen, Jesper Velgaard, Ong, S. & Mann, Matthias, 2004, In: Molecular and Cellular Proteomics. 3, 6, p. 608-14 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. 2005
  18. Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

    Gruhler, A., Olsen, Jesper Velgaard, Mohammed, S., Mortensen, P., Faergeman, N. J., Mann, Matthias & Jensen, O. N., 2005, In: Molecular and Cellular Proteomics. 4, 3, p. 310-27 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Proteomic mapping of brain plasma membrane proteins

    Nielsen, P. A., Olsen, Jesper Velgaard, Podtelejnikov, A. V., Andersen, J. R., Mann, Matthias & Wisniewski, J. R., 2005, In: Molecular and Cellular Proteomics. 4, 4, p. 402-8 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap

    Olsen, Jesper Velgaard, de Godoy, L. M. F., Li, G., Macek, B., Mortensen, P., Pesch, R., Makarov, A., Lange, O., Horning, S. & Mann, Matthias, 2005, In: Molecular and Cellular Proteomics. 4, 12, p. 2010-21 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. 2006
  22. The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins

    Adachi, J., Kumar, C., Zhang, Y., Olsen, Jesper Velgaard & Mann, Matthias, 2006, In: Genome Biology. 7, 9, p. R80

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Actin homolog MreB and RNA polymerase interact and are both required for chromosome segregation in Escherichia coli

    Kruse, Thomas, Blagoev, B., Løbner-Olesen, Anders, Wachi, M., Sasaki, K., Iwai, N., Mann, Matthias & Gerdes, K., 1 Jan 2006, In: Genes & Development. 20, 1, p. 113-124 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Top-down protein sequencing and MS3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer

    Macek, B., Waanders, L. F., Olsen, Jesper Velgaard & Mann, Matthias, 2006, In: Molecular and Cellular Proteomics. 5, 5, p. 949-58 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

    Olsen, Jesper Velgaard, Blagoev, B., Gnad, F., Macek, B., Kumar, C., Mortensen, P. & Mann, Matthias, 2006, In: Cell. 127, 3, p. 635-48 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. In-gel digestion for mass spectrometric characterization of proteins and proteomes

    Shevchenko, A., Tomas, H., Havlis, J., Olsen, Jesper Velgaard & Mann, Matthias, 2006, In: Nature Protocols (Print Edition). 1, 6, p. 2856-60 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Status of complete proteome analysis by mass spectrometry: SILAC labeled yeast as a model system

    de Godoy, L. M. F., Olsen, Jesper Velgaard, de Souza, G. A., Li, G., Mortensen, P. & Mann, Matthias, 2006, In: Genome Biology. 7, 6, p. R50

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. 2007
  29. Quantitative proteomic assessment of very early cellular signaling events

    Dengjel, J., Akimov, V., Olsen, Jesper Velgaard, Bunkenborg, J., Mann, Matthias, Blagoev, B. & Andersen, J. S., 2007, In: Nature Biotechnology. 25, 5, p. 566-8 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites

    Gnad, F., Ren, S., Cox, J., Olsen, Jesper Velgaard, Macek, B., Oroshi, M. & Mann, Matthias, 2007, In: Genome Biology. 8, 11, p. R250

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. The low molecular weight proteome of Halobacterium salinarum

    Klein, C., Aivaliotis, M., Olsen, Jesper Velgaard, Falb, M., Besir, H., Scheffer, B., Bisle, B., Tebbe, A., Konstantinidis, K., Siedler, F., Pfeiffer, F., Mann, Matthias & Oesterhelt, D., 2007, In: Journal of Proteome Research. 6, 4, p. 1510-8 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Noncovalent interaction between Ubc9 and SUMO promotes SUMO chain formation

    Knipscheer, P., van Dijk, W. J., Olsen, Jesper Velgaard, Mann, Matthias & Sixma, T. K., 2007, In: EMBO Journal. 26, 11, p. 2797-807 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Nanoelectrospray peptide mapping revisited: Composite survey spectra allow high dynamic range protein characterization without LCMS on an orbitrap mass spectrometer

    Lu, A., Waanders, L. F., Almeida, R., Li, G., Allen, M., Cox, J., Olsen, Jesper Velgaard, Bonaldi, T. & Mann, Matthias, 1 Dec 2007, In: International Journal of Mass Spectrometry. 268, 2-3, p. 158-167 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation

    Macek, B., Gnad, F., Soufi, B., Kumar, C., Olsen, Jesper Velgaard, Mijakovic, I. & Mann, Matthias, 2007, In: Molecular and Cellular Proteomics. 7, 2, p. 299-307 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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