Chuna Ram Choudhary
Professor, Group Leader, Professor
- 2023
- Published
Acetylation of histone H2B marks active enhancers and predicts CBP/p300 target genes
Narita, Takeo, Higashijima, Y., Kilic, Sinan, Liebner, Tim, Walter, Jonas & Choudhary, Chunaram, 2023, In: Nature Genetics. 55, p. 679-692Research output: Contribution to journal › Journal article › Research › peer-review
- Published
K6-linked ubiquitylation marks formaldehyde-induced RNA-protein crosslinks for resolution
Suryo Rahmanto, A., Blum, C. J., Scalera, C., Heidelberger, J. B., Mesitov, M., Horn-Ghetko, D., Gräf, J. F., Mikicic, I., Hobrecht, R., Orekhova, A., Ostermaier, M., Ebersberger, S., Möckel, M. M., Krapoth, N., Da Silva Fernandes, N., Mizi, A., Zhu, Y., Chen, J. X., Choudhary, C., Papantonis, A. & 4 others, , 2023, In: Molecular Cell. 83, 23, p. 4272-4289.e10 29 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TOBF1 modulates mouse embryonic stem cell fate through regulating alternative splicing of pluripotency genes
Aich, M., Ansari, A. H., Ding, Li, Iesmantavicius, V., Paul, D., Choudhary, Chunaram, Maiti, S., Buchholz, F. & Chakraborty, D., 2023, In: Cell Reports. 42, 10, 22 p., 113177.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
HDAC6 modulates myofibril stiffness and diastolic function of the heart
Lin, Y., Major, J. L., Liebner, Tim, Hourani, Z., Travers, J. G., Wennersten, S. A., Haefner, K. R., Cavasin, M. A., Wilson, C. E., Jeong, M. Y., Han, Y., Gotthardt, M., Ferguson, S. K., Ambardekar, A. V., Lam, M. P., Choudhary, Chunaram, Granzier, H. L., Woulfe, K. C. & McKinsey, T. A., 2022, In: Journal of Clinical Investigation. 132, 10, 14 p., e148333.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Enhancers are activated by p300/CBP activity-dependent PIC assembly, RNAPII recruitment, and pause release
Narita, Takeo, Ito, S., Higashijima, Y., Chu, W. K., Neumann, K., Walter, Jonas, Satpathy, S., Liebner, Tim, Hamilton, W. B., Maskey, E., Prus, G., Shibata, M., Iesmantavicius, V., Brickman, Joshua Mark, Anastassiadis, K., Koseki, H. & Choudhary, Chunaram, 2021, In: Molecular Cell. 81, 10, p. 2166-2182.e6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteome dynamics at broken replication forks reveal a distinct ATM-directed repair response suppressing DNA double-strand break ubiquitination
Nakamura, K., Kustatscher, G., Alabert, C., Hödl, M., Forne, I., Völker-Albert, M., Satpathy, S., Beyer, T. E., Mailand, Niels, Choudhary, Chunaram, Imhof, A., Rappsilber, J. & Groth, Anja, 2021, In: Molecular Cell. 81, 3, 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SIK2 orchestrates actin-dependent host response upon Salmonella infection
Hahn, M., Covarrubias-Pinto, A., Herhaus, L., Satpathy, S., Klann, K., Boyle, K. B., Münch, C., Rajalingam, K., Randow, F., Choudhary, Chunaram & Dikic, I., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 19, 10 p., e2024144118.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Equilibrium between nascent and parental MCM proteins protects replicating genomes
Sedlackova, H., Rask, M., Gupta, R., Choudhary, Chunaram, Somyajit, K. & Lukas, Jiri, 2020, In: Nature. 587, p. 297-302 34 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
HBO1 is required for the maintenance of leukaemia stem cells
MacPherson, L., Anokye, J., Yeung, M. M., Lam, E. Y. N., Chan, Y-C., Weng, C-F., Yeh, P., Knezevic, K., Butler, M. S., Hoegl, A., Chan, K-L., Burr, M. L., Gearing, L. J., Willson, T., Liu, J., Choi, J., Yang, Y., Bilardi, R. A., Falk, H., Nghi Nguyen & 28 others, , 2020, In: Nature. 577, 7789, p. 266-270Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation
Khoa, L. T. P., Tsan, Y., Mao, F., Kremer, D. M., Sajjakulnukit, P., Zhang, L., Zhou, B., Tong, X., Bhanu, N. V., Choudhary, Chunaram, Garcia, B. A., Yin, L., Smith, G. D., Saunders, T. L., Bielas, S. L., Lyssiotis, C. A. & Dou, Y., 2020, In: Cell Stem Cell. 27, 3, p. 441-458.e10 29 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing of the First Draft of the Human Acetylome
Choudhary, Chunaram & Mann, Matthias, 2020, In: Clinical Chemistry. 66, 6, p. 852-853 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Acetylation of intrinsically disordered regions regulates phase separation
Saito, M., Hess, D., Eglinger, J., Fritsch, A. W., Kreysing, M., Weinert, B. T., Choudhary, Chunaram & Matthias, P., Jan 2019, In: Nature Chemical Biology. 15, 1, p. 51-61Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis and Interpretation of Protein Post-Translational Modification Site Stoichiometry
Prus, Gabriela Zofia, Hoegl, A., Weinert, B. T. & Choudhary, Chunaram, 2019, In: Trends in Biochemical Sciences. 44, 11, p. 943-960Research output: Contribution to journal › Review › Research › peer-review
- Published
Analysis of human acetylation stoichiometry defines mechanistic constraints on protein regulation
Hansen, B. K., Gupta, R., Baldus, L., Lyon, D., Narita, Takeo, Lammers, M., Choudhary, Chunaram & Weinert, B. T., 2019, In: Nature Communications. 10, 11 p., 1055.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Functions and mechanisms of non-histone protein acetylation
Narita, Takeo, Weinert, B. T. & Choudhary, Chunaram, 2019, In: Nature Reviews. Molecular Cell Biology. 20, p. 156-174 19 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Proteomic exploration of lysine acetylation signaling
Choudhary, Chunaram, 2019, In: Molecular & Cellular Proteomics. 18, 8, p. S25 1 p.Research output: Contribution to journal › Conference abstract in journal › Research
- 2018
- Published
p38-MK2 signaling axis regulates RNA metabolism after UV-light-induced DNA damage
Borisova, M. E., Voigt, A., Tollenaere, M. A. X., Sahu, S. K., Juretschke, T., Kreim, N., Mailand, Niels, Choudhary, Chunaram, Bekker-Jensen, Simon Holst, Akutsu, M., Wagner, S. A. & Beli, P., 1 Dec 2018, In: Nature Communications. 9, p. 1-16 16 p., 1017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity
Gupta, R., Somyajit, K., Narita, Takeo, Maskey, E., Stanlie, A., Kremer, M., Typas, D., Lammers, M., Mailand, Niels, Nussenzweig, A., Lukas, Jiri & Choudhary, Chunaram, 2018, In: Cell. 173, 4, p. 972-988Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deletion of APC7 or APC16 Allows Proliferation of Human Cells without the Spindle Assembly Checkpoint
Wild, T., Budzowska, M., Hellmuth, S., Eibes, S., Karemore, G., Barisic, Marin, Stemmann, O. & Choudhary, Chunaram, 2018, In: Cell Reports. 25, 9, 18 p., 2317-2328.e5.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
STK3 is a therapeutic target for a subset of acute myeloid leukemias
Camgoz, A., Paszkowski-Rogacz, M., Satpathy, S., Wermke, M., Hamann, M. V., von Bonin, M., Choudhary, Chunaram, Knapp, S. & Buchholz, F., 2018, In: OncoTarget. 9, 39, p. 25458-25473 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Time-Resolved Analysis Reveals Rapid Dynamics and Broad Scope of the CBP/p300 Acetylome
Weinert, B. T., Narita, Takeo, Satpathy, S., Srinivasan, B., Hansen, B. K., Schölz, C., Hamilton, W. B., Zucconi, B. E., Wang, W. W., Liu, W. R., Brickman, Joshua Mark, Kesicki, E. A., Lai, A., Bromberg, K. D., Cole, P. A. & Choudhary, Chunaram, 2018, In: Cell. 174, 1, p. 231-244.e12 27 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
lncRNA Panct1 Maintains Mouse Embryonic Stem Cell Identity by Regulating TOBF1 Recruitment to Oct-Sox Sequences in Early G1
Chakraborty, D., Paszkowski-Rogacz, M., Berger, N., Ding, L., Mircetic, J., Fu, J., Iesmantavicius, V., Choudhary, Chunaram, Anastassiadis, K., Stewart, A. F. & Buchholz, F., 12 Dec 2017, In: Cell Reports. 21, 11, p. 3012-3021 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Redox-sensitive alteration of replisome architecture safeguards genome integrity
Somyajit, K., Gupta, R., Sedlackova, H., Neelsen, K. J., Ochs, Fena, Rask, M., Choudhary, Chunaram & Lukas, Jiri, 10 Nov 2017, In: Science. 358, 6364, p. 797-802 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours
Lasko, L. M., Jakob, C. G., Edalji, R. P., Qiu, W., Montgomery, D., Digiammarino, E. L., Hansen, T. M., Risi, R. M., Frey, R., Manaves, V., Shaw, B., Algire, M., Hessler, P., Lam, L. T., Uziel, T., Faivre, E., Ferguson, D., Buchanan, F. G., Martin, R. L., Torrent, M. & 16 others, , 5 Oct 2017, In: Nature. 550, 7674, p. 128-132 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Accurate quantification of site-specific acetylation stoichiometry reveals the impact of sirtuin deacetylase CobB on the E. coli acetylome
Weinert, B. T., Satpathy, S., Hansen, B. K., Lyon, D., Jensen, Lars Juhl & Choudhary, Chunaram, May 2017, In: Molecular and Cellular Proteomics. 16, p. 759-769Research output: Contribution to journal › Journal article › Research › peer-review
ID: 13781159
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Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage
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Deubiquitylating enzyme USP9x regulates hippo pathway activity by controlling angiomotin protein turnover
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Mte1 interacts with Mph1 and promotes crossover recombination and telomere maintenance
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