Søren Brunak

Søren Brunak

Professor

ORCID: 0000-0003-0316-5866

Publication year:
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101 - 125 out of 343Page size: 25
  1. 2021
  2. Published

    Integrating Longitudinal Clinical and Baseline Multiomics Data for Predicting C-Peptide Progression in Newly Diagnosed Type 1 Diabetes: 1111-P

    Brorsson, C., Armenteros, J. J. A., Mazzoni, G., Kaur, S., Schulte, A. M., Mathieu, C. & Brunak, Søren, 2021. 1 p.

    Research output: Contribution to conference › Poster › Research

  3. Published

    Mapping the human genetic architecture of COVID-19

    Niemi, M. E. K., Karjalainen, J., Liao, R. G., Neale, B. M., Daly, M., Ganna, A., Pathak, G. A., Andrews, S. J., Kanai, M., Veerapen, K., Fernandez-Cadenas, I., Schulte, E. C., Striano, P., Marttila, M., Minica, C., Marouli, E., Karim, M. A., Wendt, F. R., Savage, J., Sloofman, L. & 41 others, Butler-Laporte, G., Kim, H., Kanoni, S., Okada, Y., Byun, J., Han, Y., Uddin, M. J., Smith, G. D., Willer, C. J., Buxbaum, J. D., Karjalainen, J., Mehtonen, J., Folkersen, L., Moltke, Ida, Hinney, A., Wang, C., Ellinghaus, D., Brunak, Søren, Castro, P., Guindo Martínez, Marta, Lee, J. Y., Loos, Ruth, Zhao, J. H., Sun, Y. V., Wang, B., Parker, R., Garcia, S. M., Smith, O., Davis, C., COVID-19 Host Genetics Initiative, C. H. G. I., 23andMe COVID-19 Team, 2. C. T., Norwegian SARS-CoV-2 Study Grp, N. S. S. G., Humanitas COVID-19 Task Force, H. C. T. F., Humanitas Gavazzeni COVID-19 Task, H. G. C. T., FHoGID, F., RegCOVID, R., P-PredictUs, P., SeroCOVID, S., CRiPSI, C., Genes & Hlth Res Team, G. &. H. R. T. & UCLA Hlth ATLAS Data Mart Working, U. H. A. D. M. W., 2021, In: Nature. 600, p. 472-477

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Optimizing drug selection from a prescription trajectory of one patient

    Aguayo-Orozco, A., Haue, Amalie Dahl, Jørgensen, Isabella Friis, Westergaard, David, Moseley, P. L., Mortensen, Laust Hvas & Brunak, Søren, 2021, In: npj Digital Medicine. 4, 1, 150.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Processes Underlying Glycemic Deterioration in Type 2 Diabetes: An IMI DIRECT Study

    Bizzotto, R., Jennison, C., Jones, A. G., Kurbasic, A., Tura, A., Kennedy, G., Bell, J. D., Thomas, E. L., Frost, G., Eriksen, R., Koivula, R. W., Brage, S., Kaye, J., Hattersley, A. T., Heggie, A., McEvoy, D., 't Hart, L. M., Beulens, J. W., Elders, P., Musholt, P. B. & 28 others, Ridderstrale, M., Hansen, T. H., Allin, K. H., Hansen, Torben, drb459, drb459, Lundgaard, Agnete Troen, Thomsen, Henrik S., De Masi, F., Tsirigos, Konstantinos, Brunak, Søren, Vinuela, A., Mahajan, A., McDonald, T. J., Kokkola, T., Forgie, I. M., Giordano, G. N., Pavo, I., Ruetten, H., Dermitzakis, E., McCarthy, M. I., Pedersen, Oluf Borbye, Schwenk, J. M., Adamski, J., Franks, P. W., Walker, M., Pearson, E. R., Mari, A. & IMI-DIRECT consortium, I. C., 2021, In: Diabetes Care. 44, 2, p. 511-518 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Profiles of glucose metabolism in different prediabetes phenotypes, classified by fasting glycemia, 2-hour OGTT, glycated hemoglobin, and 1-hour OGTT: An IMI DIRECT study

    Tura, A., Grespan, E., Göbl, C. S., Koivula, R. W., Franks, P. W., Pearson, E. R., Walker, M., Forgie, I. M., Giordano, G. N., Pavo, I., Ruetten, H., Dermitzakis, E. T., McCarthy, M. I., Pedersen, O., Schwenk, J. M., Adamski, J., De Masi, F., Tsirigos, K. D., Brunak, S., Viñuela, A. & 17 others, Mahajan, A., McDonald, T. J., Kokkola, T., Vangipurapu, J., Cederberg, H., Laakso, M., Rutters, F., Elders, P. J. M., Koopman, A. D. M., Beulens, J. W., Ridderstråle, M., Hansen, T. H., Allin, K. H., Hansen, Torben, drb459, drb459, Mari, A. & IMI-DIRECT consortium, I. C., 2021, In: Diabetes. 70, 6, db210227.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Semen quality and waiting time to pregnancy explored using association mining

    Romero Herrera, J. A., Bang, A. K., Priskorn, L., Izarzugaza, J. M. G., Brunak, Søren & Jørgensen, N., 2021, In: Andrology. 9, 2, p. 577-587 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The burden of disease of three food-associated heavy metals in clusters in the Danish population - Towards targeted public health strategies

    Herrera, J. A. R., Thomsen, S. T., Jakobsen, L. S., Fagt, S., Banasik, Karina, Izarzugaza, J. M. G., Brunak, Søren & Pires, S. M., 2021, In: Food and Chemical Toxicology. 150, 112072.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The impact of early pregnancy complications on completed family size—A nationwide, registry-based cohort study with 40 years of data

    Kolte, A. M., Westergaard, David, Lidegaard, Øjvind, Brunak, Søren & Nielsen, Henriette Svarre, 2021, In: Acta Obstetricia et Gynecologica Scandinavica. 100, 12, p. 2226-2233

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Time-ordered comorbidity correlations identify patients at risk of mis- and overdiagnosis

    Jørgensen, Isabella Friis & Brunak, Søren, 2021, In: npj Digital Medicine. 4, 10 p., 12.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Understanding inherent image features in CNN-based assessment of diabetic retinopathy

    Reguant, R., Brunak, Søren & Saha, S., 2021, In: Scientific Reports. 11, 12 p., 9704.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. 2020
  13. Published

    Dietary metabolite profiling brings new insight into the relationship between nutrition and metabolic risk: An IMI DIRECT study

    Eriksen, R., Perez, I. G., Posma, J. M., Haid, M., Sharma, S., Prehn, C., Thomas, L. E., Koivula, R. W., Bizzotto, R., Prehn, C., Mari, A., Giordano, G. N., Pavo, I., Schwenk, J. M., De Masi, F., Tsirigos, K. D., Brunak, S., Viñuela, A., Mahajan, A., McDonald, T. J. & 18 others, Kokkola, T., Rutter, F., Teare, H., Hansen, T. H., Fernandez, J., Jones, A., Jennison, C., Walker, M., McCarthy, M. I., Pedersen, Oluf Borbye, Ruetten, H., Forgie, I., Bell, J. D., Pearson, E. R., Franks, P. W., Adamski, J., Holmes, E. & Frost, G., Aug 2020, In: EBioMedicine. 58, p. 102932

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Integrative pathway enrichment analysis of multivariate omics data

    Paczkowska, M., Barenboim, J., Sintupisut, N., Fox, N. S., Zhu, H., Abd-Rabbo, D., Mee, M. W., Boutros, P. C., Abascal, F., Amin, S. B., Bader, G. D., Beroukhim, R., Bertl, J., Boroevich, K. A., Brunak, S., Campbell, P. J., Carlevaro-Fita, J., Chakravarty, D., Chan, C. W. Y., Chen, K. & 30 others, Choi, J. K., Deu-Pons, J., Dhingra, P., Diamanti, K., Feuerbach, L., Fink, J. L., Fonseca, N. A., Frigola, J., Gambacorti-Passerini, C., Garsed, D. W., Gerstein, M., Getz, G., Gonzalez-Perez, A., Guo, Q., Gut, I. G., Haan, D., Hamilton, M. P., Haradhvala, N. J., Harmanci, A. O., Helmy, M., Herrmann, C., Hess, J. M., Hobolth, A., Hodzic, E., Hong, C., Hornshøj, H., Nielsen, M. M., Pedersen, J. S., Sidiropoulos, N. & Weischenfeldt, Joachim Lütken, 5 Feb 2020, In: Nature Communications. 11, 1, 735.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    ARDD 2020: from aging mechanisms to interventions

    Mkrtchyan, G. V., Abdelmohsen, K., Andreux, P., Bagdonaite, I., Barzilai, N., Brunak, S., Cabreiro, F., Cabo, R. D., Campisi, J., Cuervo, A. M., Demaria, M., Ewald, C. Y., Fang, E. F., Faragher, R., Ferrucci, L., Freund, A., Silva-García, C. G., Georgievskaya, A., Gladyshev, V. N., Glass, D. J. & 46 others, Gorbunova, V., Grey, A. D., He, W. W., Hoeijmakers, J., Hoffmann, Eva, Horvath, S., Houtkooper, R. H., Jensen, Majken Karoline, Jensen, M. B., Kane, A., Kassem, Moustapha Saad El-Deen, Keizer, P. D., Kennedy, B., Karsenty, G., Lamming, D. W., Lee, K. F., MacAulay, Nanna, Mamoshina, P., Mellon, J., Molenaars, M., Moskalev, A., Mund, Andreas, Niedernhofer, L., Osborne, Brenna, Pak, H. H., Parkhitko, A., Raimundo, N., Rando, T. A., Rasmussen, Lene Juel, Reis, C., Riedel, C. G., Franco-Romero, A., Schumacher, B., Sinclair, D. A., Suh, Y., Taub, P. R., Toiber, D., Treebak, Jonas Thue, Valenzano, D. R., Verdin, E., Vijg, J., Young, S., Zhang, L., Bakula, Daniela Janina, Zhavoronkov, A. & Scheibye-Knudsen, Morten, 2020, In: Aging. 12, 24, p. 24486-24503 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Age-stratified longitudinal study of Alzheimer's and vascular dementia patients

    Jørgensen, Isabella Friis, Aguayo-Orozco, A., Lademann, M. & Brunak, Søren, 2020, In: Alzheimer's & Dementia. p. 908-917

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Alcoholic liver disease: A registry view on comorbidities and disease prediction

    Grissa, Dhouha, Nytoft Rasmussen, D., Krag, A., Brunak, Søren & Jensen, Lars Juhl, 2020, In: P L o S One. 16, 9, 19 p., 1008244.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Association between antipsychotic drug dose and length of clinical notes: a proxy of disease severity?

    Sørup, Freja Karuna Hemmingsen, Brunak, Søren & Eriksson, R., 2020, In: BMC Medical Research Methodology. 20, 1, 7 p., 107.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

    Carlevaro-Fita, J., Lanzós, A., Feuerbach, L., Hong, C., Mas-Ponte, D., Pedersen, J. S., Johnson, R., Sidiropoulos, N., Weischenfeldt, Joachim Lütken & Brunak, Søren, 2020, In: Communications Biology. 3, 1, p. 1-16 56.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Combined burden and functional impact tests for cancer driver discovery using DriverPower

    Shuai, S., Abascal, F., Amin, S. B., Bader, G. D., Bandopadhayay, P., Barenboim, J., Beroukhim, R., Bertl, J., Boroevich, K. A., Brunak, S., Campbell, P. J., Carlevaro-Fita, J., Chakravarty, D., Chan, C. W. Y., Chen, K., Choi, J. K., Deu-Pons, J., Dhingra, P., Diamanti, K., Feuerbach, L. & 32 others, Fink, J. L., Fonseca, N. A., Frigola, J., Gambacorti-Passerini, C., Garsed, D. W., Gerstein, M., Getz, G., Guo, Q., Gut, I. G., Haan, D., Hamilton, M. P., Haradhvala, N. J., Harmanci, A. O., Helmy, M., Herrmann, C., Hess, J. M., Hobolth, A., Hodzic, E., Hong, C., Hornshøj, H., Isaev, K., Izarzugaza, J. M. G., Johnson, R., Johnson, T. A., Juul, M., Juul, R. I., Kahles, A., Pedersen, J. S., Sidiropoulos, N., Weischenfeldt, Joachim Lütken, PCAWG Drivers and Functional Interpretation Working Group, P. D. A. F. I. W. G. & PCAWG Consortium, P. C., 2020, In: Nature Communications. 11, 1, 12 p., 734.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Complete Topological Mapping of a Cellular Protein Interactome Reveals Bow-Tie Motifs as Ubiquitous Connectors of Protein Complexes

    Niss, K., Gomez-Casado, C., Hjaltelin, Jessica Xin, Joeris, T., Agace, W. W., Belling, K. G. & Brunak, Søren, 2020, In: Cell Reports. 31, 11, 15 p., 107763.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Conflicting associations between dietary patterns and changes of anthropometric traits across subgroups of middle-aged women and men

    Jiang, L., Audouze, K., Romero Herrera, J. A., Ängquist, Lars, Kjærulff, S. K., Izarzugaza, J. M. G., Tjønneland, Anne, Halkjær, J., Overvad, K., Sørensen, Thorkild I.A. & Brunak, Søren, 2020, In: Clinical Nutrition. 39, 1, p. 265-275

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Disease Trajectories for Hidradenitis Suppurativa in the Danish Population

    Andersen, Rune Kjærsgaard, Jørgensen, Isabella Friis, Reguant, R., Jemec, Gregor & Brunak, Søren, 2020, In: JAMA Dermatology. 156, 7, p. 780-786

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Disease trajectory browser for exploring temporal, population-wide disease progression patterns in 7.2 million Danish patients

    Siggaard, T., Reguant, R., Jørgensen, Isabella Friis, Haue, Amalie Dahl, Lademann, M., Aguayo-Orozco, A., Hjaltelin, Jessica Xin, Jensen, A. B., Banasik, Karina & Brunak, Søren, 2020, In: Nature Communications. 11, 1, 10 p., 4952.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Dynamic and explainable machine learning prediction of mortality in patients in the intensive care unit: a retrospective study of high-frequency data in electronic patient records

    Thorsen-Meyer, H., Nielsen, A. B., Nielsen, A. P., Kaas-Hansen, Benjamin Skov, Toft, P., Schierbeck, J., Strøm, T., Chmura, Piotr Jaroslaw, Heimann, M., Dybdahl, L., Spangsege, L., Hulsen, P., Belling, K., Brunak, Søren & Perner, Anders, 2020, In: The Lancet Digital Health. 2, 4, p. e179–91 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Effects of active farnesoid X receptor on GLUTag enteroendocrine L cells

    Niss, K., Jakobsson, M. E., Westergaard, David, Belling, K. G., Olsen, Jesper Velgaard & Brunak, Søren, 2020, In: Molecular and Cellular Endocrinology. 517, 9 p., 110923.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Genetic variability in the absorption of dietary sterols affects the risk of coronary artery disease

    Helgadottir, A., Thorleifsson, G., Alexandersson, K. F., Tragante, V., Thorsteinsdottir, M., Eiriksson, F. F., Gretarsdottir, S., Björnsson, E., Magnusson, O., Sveinbjornsson, G., Jonsdottir, I., Steinthorsdottir, V., Ferkingstad, E., Jensson, B. Ö., Stefansson, H., Olafsson, I., Christensen, A. H., Torp-Pedersen, C., Køber, L., Pedersen, O. B. & 23 others, Erikstrup, C., Sørensen, E., Brunak, Søren, Banasik, Karina, Hansen, Thomas Folkmann, Nyegaard, M., Eyjolfssson, G. I., Sigurdardottir, O., Thorarinsson, B. L., Matthiasson, S. E., Steingrimsdottir, T., Bjornsson, E. S., Danielsen, R., Asselbergs, F. W., Arnar, D. O., Ullum, H., Bundgård, Henning, Sulem, P., Thorsteinsdottir, U., Thorgeirsson, G., Holm, H., Gudbjartsson, D. F. & Stefansson, K., 2020, In: European Heart Journal. 41, 28, p. 2618-2628 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 12895347