Brunak Group – University of Copenhagen

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Søren Brunak

Søren Brunak

Research director, professor


  1. 2018
  2. Published

    Analysis of Time-Series Gene Expression Data to Explore Mechanisms of Chemical-Induced Hepatic Steatosis Toxicity. / Aguayo-Orozco, Alejandro; Bois, Frederic Yves; Brunak, Søren; Taboureau, Olivier.

    In: Frontiers in Genetics, Vol. 9, 396, 2018, p. 1-15.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A Novel Familial Cardiac Arrhythmia Syndrome with Widespread ST-Segment Depression. / Bundgård, Henning; Jøns, Christian; Lodder, Elisabeth M; Izarzugaza, Jose M.G.; Romero Herrera, Jose A; Pehrson, Steen; Tfelt-Hansen, Jacob; Ahlberg, Gustav; Olesen, Morten S; Holst, Anders G.; Wellens, Hein; de Villiers, Carin; Hastings, Robert; Stuart, Graham; Brunak, Søren; Wilde, Arthur A M; Watkins, Hugh; Christensen, Alex H.

    In: The New England Journal of Medicine, Vol. 379, No. 18, 2018, p. 1780-1781.

    Research output: Contribution to journalComment/debateResearch

  4. Published

    Familial co-occurrence of congenital heart defects follows distinct patterns. / Ellesøe, Sabrina G; Workman, Christopher T; Bouvagnet, Patrice; Loffredo, Christopher A; McBride, Kim L; Hinton, Robert B; van Engelen, Klaartje; Gertsen, Emma C; Mulder, Barbara J M; Postma, Alex V; Anderson, Robert H; Hjortdal, Vibeke E; Brunak, Søren; Larsen, Lars A.

    In: European Heart Journal, Vol. 39, No. 12, 03.2018, p. 1015–1022.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    A generic deep convolutional neural network framework for prediction of receptor–ligand interactions - NetPhosPan : application to kinase phosphorylation prediction. / Fenoy, Emilio; Izarzugaza, Jose M.G.; Jurtz, Vanessa; Brunak, Søren; Nielsen, Morten.

    In: Bioinformatics, 2018, p. 1-10.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Integrative network analysis highlights biological processes underlying GLP-1 stimulated insulin secretion : A DIRECT study. / Gudmundsdottir, Valborg; Pedersen, Helle Krogh; Allebrandt, Karla Viviani; Brorsson, Caroline Anna; van Leeuwen, Nienke; Banasik, Karina; Mahajan, Anubha; Groves, Christopher J; van de Bunt, Martijn; Dawed, Adem Y; Fritsche, Andreas; Staiger, Harald; Simonis-Bik, Annemarie M C; Deelen, Joris; Kramer, Mark H H; Dietrich, Axel; Hübschle, Thomas; Willemsen, Gonneke; Häring, Hans-Ulrich; de Geus, Eco J C; Boomsma, Dorret I; Eekhoff, Elisabeth M W; Ferrer, Jorge; McCarthy, Mark I; Pearson, Ewan R; Gupta, Ramneek; Brunak, Søren; 't Hart, Leen M.

    In: P L o S One, Vol. 13, No. 1, e0189886, 2018, p. 1-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Præcisionskardiologi. / Haue, Amalie Dahl; Vissing, Christoffer Rasmus; Tfelt-Hansen, Jacob; Brunak, Søren; Bundgaard, Henning; Weeke, Peter E.

    In: Ugeskrift for Laeger, Vol. 180, No. 20A, 01.10.2018, p. 1851-54.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. E-pub ahead of print

    A large-cohort, longitudinal study determines pre-cancer disease routes across different cancer types. / Hu, Jessica X; Helleberg, Marie; Jensen, Anders B; Brunak, Søren; Lundgren, Jens.

    In: Cancer Research, 27.12.2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Increase in clinically recorded type 2 diabetes after colectomy. / Jensen, Anders B; Sørensen, Thorkild Ia; Pedersen, Oluf; Jess, Tine; Brunak, Søren; Allin, Kristine H.

    In: eLife, Vol. 7, e37420, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Analysis of a gene panel for targeted sequencing of colorectal cancer samples. / Jensen, Klaus Højgaard; Izarzugaza, Jose M.G.; Juncker, Agnieszka Sierakowska; Hansen, Rasmus Borup; Hansen, Torben Frøstrup; Timshel, Pascal; Blondal, Thorarinn; Jensen, Thomas Skøt; Rygaard-Hjalsted, Eske; Mouritzen, Peter; Thorsen, Michael; Wernersson, Rasmus; Nielsen, Henrik Bjørn; Jakobsen, Anders; Brunak, Søren; Sørensen, Flemming Brandt.

    In: OncoTarget, Vol. 9, No. 10, 2018, p. 9043-9060.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Ibuprofen alters human testicular physiology to produce a state of compensated hypogonadism. / Kristensen, David Møbjerg; Desdoits-Lethimonier, Christèle; Mackey, Abigail L.; Dalgaard, Marlene Danner; De Masi, Federico; Munkbøl, Cecilie Hurup; Styrishave, Bjarne; Antignac, Jean-Philippe; Le Bizec, Bruno; Platel, Christian; Hay-Schmidt, Anders; Jensen, Tina Kold; Lesné, Laurianne; Mazaud-Guittot, Séverine; Kristiansen, Karsten; Brunak, Søren; Kjaer, Michael; Juul, Anders; Jégou, Bernard.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, No. 4, 2018, p. e715-e724.

    Research output: Contribution to journalJournal articleResearchpeer-review

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