Søren Brunak

Søren Brunak

Professor


  1. Published

    SignalP 5.0 improves signal peptide predictions using deep neural networks

    Armenteros, J. J. A., Tsirigos, Konstantinos, Sønderby, C. K., Petersen, T. N., Winther, Ole, Brunak, Søren, von Heijne, G. & Nielsen, H., 18 Feb 2019, In: Nature Biotechnology. 37, 4, p. 420-423

    Research output: Contribution to journalJournal articleCommunication

  2. Published

    Genetic Variants Close to TTN, NKX2-5, and MYH6 Associate With AVNRT

    Andreasen, L., Ahlberg, G., Ægisdóttir, H. M., Sveinbjörnsson, G., Lundegaard, P. R., Hartmann, J. P., Paludan-Müller, C., Hadji-Turdeghal, K., Ghouse, J., Pehrson, S., Jensen, H. K., Riahi, S., Hansen, J., Sandgaard, N., Sørensen, E., Banasik, K., Sækmose, S. G., Bruun, M. T., Hjalgrim, H., Erikstrup, C. & 18 others, Pedersen, Ole Birger Vesterager, Wittig, M., Haunsø, Stig, Ostrowski, Sisse Rye, Genomic Consortium, D., Franke, A., Brunak, Søren, Kanters, Jørgen K., Ellervik, Christina, Bundgård, Henning, Ullum, H., Gudbjartsson, D. F., Thorsteinsdottir, U., Holm, H., Arnar, D. O., Stefansson, K., Svendsen, Jesper Hastrup & Olesen, Morten Steen Salling, 2022, In: Circulation Research. 131, 10, p. 862-865

    Research output: Contribution to journalLetterResearchpeer-review

  3. Published

    Number of diagnoses based on number of publications

    Andersen, R. K., Bouazzi, D., Jørgensen, F., Brunak, Søren & Jemec, Gregor, 2020, In: Experimental Dermatology. 29, S1, p. 8-9 78.

    Research output: Contribution to journalConference abstract in journalResearch

  4. Published
  5. Published

    Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models: [with Author Correction]

    Allesøe, R. L., Lundgaard, A. T., Hernández Medina, R., Aguayo-Orozco, A., Johansen, J., Nissen, J. N., Brorsson, C., Mazzoni, G., Niu, L., Biel, J. H., Brasas, V., Webel, H., Benros, M. E., Pedersen, A. G., Chmura, P. J., Jacobsen, U. P., Mari, A., Koivula, R., Mahajan, A., Vinuela, A. & 31 others, Tajes, J. F., Sharma, S., Haid, M., Hong, M., Musholt, P. B., De Masi, F., Vogt, J., Pedersen, H. K., Gudmundsdottir, V., Jones, A., Kennedy, G., Bell, J., Thomas, E. L., Frost, G., Thomsen, Henrik S., Hansen, E., Hansen, T. H., drb459, drb459, Muilwijk, M., Blom, M. T., 't Hart, L. M., Pattou, F., Raverdy, V., Brage, S., Ridderstråle, M., Pedersen, Oluf Borbye, Hansen, Torben, Banasik, Karina, Rasmussen, Simon, Brunak, Søren & IMI-DIRECT consortium, I. C., 2023, In: Nature Biotechnology. 41, 3, p. 399–408 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Population genomics of bronze age Eurasia

    Allentoft, M. E., Sikora, M., Sjogren, K-G., Rasmussen, S., Rasmussen, M., Stenderup, J., Damgaard, P. D. B., Schroeder, H., Ahlstrom, T., Vinner, L., Malaspinas, A. S., Margaryan, A., Higham, T., Chivall, D., Lynnerup, N., Harvig, L. L., Baron, J., Della Casa, P., Dabrowski, P., Duffy, P. R. & 46 others, Ebel, A. V., Epimakhov, A., Frei, K., Furmanek, M., Gralak, T., Gromov, A., Gronkiewicz, S., Grupe, G., Hajdu, T., Jarysz, R., Khartanovich, V., Khokhlov, A., Kiss, V., Kolar, J., Kriiska, A., Lasak, I., Longhi, C., McGlynn, G., Merkevicius, A., Merkyte, Inga, Metspalu, M., Mkrtchyan, R., Moiseyev, V., Paja, L., Palfi, G., Pokutta, D., Pospieszny, L., Price, T. D., Saag, L., Sablin, M., Shishlina, N., Smrcka, V., Soenov, V. I., Szeverenyi, V., Toth, G., Trifanova, S. V., Varul, L., Vicze, M., Yepiskoposyan, L., Zhitenev, V., Orlando, L. A. A., Sicheritz-Ponten, T., Brunak, Søren, Nielsen, Rasmus, Kristiansen, K. & Willerslev, Eske, 2015, In: Nature Genetics. 522, 7555, p. 167-172 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Reduced vitamin D-induced cathelicidin production and killing of Mycobacterium tuberculosis in macrophages from a patient with a non-functional vitamin D receptor: A case report

    Al-Jaberi, F. A. H., Crone, C. G., Lindenstrøm, T., Arildsen, Nicolai Skovbjerg, Lindeløv, E. S., Aagaard, L., Gravesen, E., Mortensen, R., Andersen, A. B., Ølgaard, Klaus, Hjaltelin, Jessica Xin, Brunak, Søren, Bonefeld, Charlotte Menne, Kongsbak-Wismann, Martin & Geisler, Carsten, 2022, In: Frontiers in Immunology. 13, 9 p., 1038960.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Impaired Vitamin D Signaling in T Cells From a Family With Hereditary Vitamin D Resistant Rickets

    Al-Jaberi, F. A. H., Kongsbak-Wismann, Martin, Aguayo-Orozco, A., Krogh, Nicolai, Buus, Terkild Brink, Lopez, D. V., Rode, A. K. O., Gravesen, Eva, Ølgaard, Klaus, Brunak, Søren, Woetmann, Anders , Ødum, Niels, Bonefeld, Charlotte Menne & Geisler, Carsten, 2021, In: Frontiers in Immunology. 12, 11 p., 684015.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    sAOP: linking chemical stressors to adverse outcomes pathway networks

    Aguayo-Orozco, A., Audouze, K., Siggaard, T., Barouki, R., Brunak, Søren & Taboureau, O., 2019, In: Bioinformatics. 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Analysis of Time-Series Gene Expression Data to Explore Mechanisms of Chemical-Induced Hepatic Steatosis Toxicity

    Aguayo-Orozco, A., Bois, F. Y., Brunak, Søren & Taboureau, O., 2018, In: Frontiers in Genetics. 9, p. 1-15 396.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 12895347