Nadezhda Tsankova Doncheva
Assistant Professor
Jensen Group
Blegdamsvej 3, 2200 København N.
Member of:
- 2020
- Published
Proceedings of the EuBIC-MS 2020 Developers’ Meeting
Ashwood, C., Bittremieux, W., Deutsch, E. W., Doncheva, N. T., Dorfer, V., Gabriels, R., Gorshkov, V., Gupta, S., Jones, A. R., Käll, L., Kopczynski, D., Lane, L., Lautenbacher, L., Legeay, M., Locard-Paulet, M., Mesuere, B., Perez-Riverol, Y., Netz, E., Pfeuffer, J., Sachsenberg, T. & 13 others, , 2020, In: EuPA Open Proteomics. 24, p. 1-6 6 p.Research output: Contribution to journal › Editorial › Research
- Published
Visualize omics data on networks with Omics Visualizer, a Cytoscape App
Legeay, M., Doncheva, Nadezhda Tsankova, Morris, J. H. & Jensen, Lars Juhl, 2020, In: F1000Research. 9, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3
Chandrasekaran, A., Dittlau, K. S., Corsi, G. I., Haukedal, H., Doncheva, N. T., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Zhang, Y., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J. E., Kolko, M., Kobolák, J., Dinnyés, A., Hyttel, P., Palakodeti, D. & 5 others, , 2021, In: Stem Cell Reports. 16, 11, p. 2736-2751Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epistatic interactions promote persistence of NS3-Q80K in HCV infection by compensating for protein folding instability
Dultz, G., Srikakulam, S. K., Konetschnik, M., Shimakami, T., Doncheva, Nadezhda Tsankova, Dietz, J., Sarrazin, C., Biondi, R. M., Zeuzem, S., Tampe, R., Kalinina, O. & Welsch, C., 2021, In: Journal of Biological Chemistry. 297, 3, 12 p., 101031.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Human pathways in animal models: possibilities and limitations
Doncheva, Nadezhda Tsankova, Palasca, Oana, Yarani, R., Litman, Thomas, Anthon, Christian, Groenen, M. A. M., Stadler, P. F., Pociot, Flemming, Jensen, Lars Juhl & Gorodkin, Jan, 2021, In: Nucleic Acids Research. 49, 4, p. 1859-1871 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets
Szklarczyk, D., Gable, A. L., Nastou, Katerina, Lyon, D., Kirsch, Rebecca, Pyysalo, S., Doncheva, Nadezhda Tsankova, Legeay, M., Fang, T., Bork, P., Jensen, Lars Juhl & von Mering, C., 2021, In: Nucleic Acids Symposium Series. 49, D1, p. D605-D612 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks
Doncheva, Nadezhda Tsankova, Morris, J. H., Holze, H., Kirsch, Rebecca, Nastou, Katerina, Cuesta-Astroz, Y., Rattei, T., Szklarczyk, D., Von Mering, C. & Jensen, Lars Juhl, 2022, In: Journal of Proteome Research. 22, 2, p. 637-646Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differentially Expressed miRNAs in Ulcerative Colitis and Crohn's Disease
Yarani, R., Shojaeian, A., Palasca, Oana, Doncheva, Nadezhda Tsankova, Jensen, Lars Juhl, Gorodkin, Jan & Pociot, Flemming, 2022, In: Frontiers in Immunology. 13, 21 p., 865777.Research output: Contribution to journal › Review › Research › peer-review
- Published
The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production
Geissler, Adrian Sven, Poulsen, L. D., Doncheva, Nadezhda Tsankova, Anthon, Christian, Seemann, Ernst Stefan, González-Tortuero, E., Breüner, A., Jensen, Lars Juhl, Hjort, C., Vinther, Jeppe & Gorodkin, Jan, 2022, In: Frontiers in Microbiology. 13, 17 p., 909493.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Alteration of microglial metabolism and inflammatory profile contributes to neurotoxicity in a hiPSC-derived microglia model of frontotemporal dementia 3
Haukedal, H., Syshøj Lorenzen, S., Westi, Emil Winther, Corsi, G., Gadekar, V. P., McQuade, A., Davtyan, H., Doncheva, Nadezhda Tsankova, Schmid, B., Chandrasekaran, Abinaya, Seemann, Ernst Stefan, Cirera, Susanna, Blurton-Jones, M., Meyer, M., Gorodkin, Jan, Aldana, Blanca & Freude, Kristine, 2023, In: Brain, Behavior, and Immunity. 113, p. 353-373Research output: Contribution to journal › Journal article › Research › peer-review
ID: 161289218
Most downloads
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514
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STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
139
downloads
Viruses.STRING: A Virus-Host Protein-Protein Interaction Database
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
59
downloads
Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3
Research output: Contribution to journal › Journal article › Research › peer-review
Published