Nadezhda Tsankova Doncheva
Assistant Professor
Jensen Group
Blegdamsvej 3, 2200 København N.
ORCID: 0000-0002-8806-6850
Current position
05/2020–present: Assistant Professor at the NNF Center for Protein Research at the University of Copenhagen, Denmark
Previous positions
- 05/2016–05/2020: PostDoc researcher at the NNF Center for Protein Research and at the Center for non-coding RNA in Technology and Health at the University of Copenhagen, Denmark
- 01/2010–05/2016: Research scientist in the Department for Computational Biology and Applied Algorithmics at the Max Planck Institute for Informatics, Germany
- 03/2013–05/2013: Research scientist in the Resource on Biocomputing, Visualization, and Informatics at the University of California, San Francisco, USA
Education
- PhD (Dr. rer. nat), Max Planck Institute for Informatics and Saarland University, Germany (June 2016)
- Masters (M. Sc.) in Bioinformatics, Saarland University, Germany (Nov 2009)
- Bachelor (B.S.) in Computational Molecular Biology, Saarland University, Germany (Oct 2007)
- German high school diploma, German Language School “Prof. Konstantin Galabov”, Bulgaria (May 2004)
Research Awards
- Conference travel fellowship for ISMB/ECCB 2015
- BioVis 2013 data contest overall favorite (IEEE BioVis 2013, Atlanta, US)
- Travel grant of the Boehringer Ingelheim Fonds for a 3-month research visit at UCSF, USA (March - May 2013)
- Conference travel fellowships for VIZBI 2010
- Conference travel fellowships for ECCB10
- Scholarship for excellent foreign students at the Saarland Universities (3 months in 2007 and 2009)
Teaching
- Bioinformatics and Systems Biology, MSc Human Biology, University of Copenhagen, Denmark (yearly since 2016)
- Bioinformatics analysis of gene expression data, PhD course, University of Copenhagen, Denmark (yearly since 2019)
- Big Data Analytics and Machine Learning I – Computational Biology in Translational Medicine, BRIDGE PostDoc course, University of Copenhagen, Denmark (yearly since 2019)
- EMBO Practical Course on Computational analysis of protein-protein interactions, PhD/PostDoc course, different locations (yearly 2011-2019)
- Cytoscape/STRING Workshops, PhD/PostDoc level, at different universities in Denmark (yearly since 2017)
ID: 161289218
Most downloads
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465
downloads
STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
Research output: Contribution to journal › Journal article › peer-review
Published -
116
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Viruses.STRING: A Virus-Host Protein-Protein Interaction Database
Research output: Contribution to journal › Journal article › peer-review
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43
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Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3
Research output: Contribution to journal › Journal article › peer-review
Published