Nadezhda Tsankova Doncheva

Nadezhda Tsankova Doncheva

Postdoc

  • Disease Systems Biology Program

    Blegdamsvej 3, 2200 København N, Bygning 6, Building: 06-2-12

    Phone: +45 35 33 22 04

Member of:


    Publication year:
    1. 2019
    2. Published

      Cytoscape stringApp : Network analysis and visualization of proteomics data. / Doncheva, Nadezhda T; Morris, John; Gorodkin, Jan; Jensen, Lars J.

      In: Journal of Proteome Research, Vol. 18, No. 2, 2019, p. 623-632.

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      Near-Neighbor Interactions in the NS3-4A Protease of HCV Impact Replicative Fitness of Drug-Resistant Viral Variants. / Doncheva, Nadezhda T.; Domingues, Francisco S.; McGivern, David R.; Shimakami, Tetsuro; Zeuzem, Stefan; Lengauer, Thomas; Lange, Christian M.; Albrecht, Mario; Welsch, Christoph.

      In: Journal of Molecular Biology, Vol. 431, No. 12, 2019, p. 2354-2368.

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. Published

      STRING v11 : protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets. / Szklarczyk, Damian; Gable, Annika L; Lyon, David; Junge, Alexander; Wyder, Stefan; Huerta-Cepas, Jaime; Simonovic, Milan; Doncheva, Nadezhda T; Morris, John H; Bork, Peer; Jensen, Lars J; von Mering, Christian.

      In: Nucleic Acids Research, Vol. 47, No. D1, 2019, p. D607-D613.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Transcriptome landscape of protein-coding genes and long noncoding RNAs in the colon and blood of DSS-induced mouse model of Acute ulcerative colitis. / Yarani, R.; Palasca, O.; Doncheva, N. Tsankova; Anthon, C.; Pilecki, B.; Litman, T.; Holmskov, U.; Jensen, L. J.; Gorodkin, J.; Pociot, F.

      In: Journal of Crohn's and Colitis, Vol. 13, 2019, p. S129-S130.

      Research output: Contribution to journalConference abstract in journalResearchpeer-review

    6. 2018
    7. Published

      Consistent Prediction of Mutation Effect on Drug Binding in HIV-1 Protease Using Alchemical Calculations. / Bastys, Tomas; Gapsys, Vytautas; Doncheva, Nadezhda T.; Kaiser, Rolf; De Groot, Bert L.; Kalinina, Olga V.

      In: Journal of Chemical Theory and Computation, Vol. 14, No. 7, 10.07.2018, p. 3397-3408.

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      Viruses.STRING : A Virus-Host Protein-Protein Interaction Database. / Cook, Helen Victoria; Doncheva, Nadezhda Tsankova; Szklarczyk, Damian; von Mering, Christian; Jensen, Lars Juhl.

      In: Viruses, Vol. 10, No. 10, 519, 2018, p. 1-11.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. 2017
    10. Published

      The STRING database in 2017 : quality-controlled protein-protein association networks, made broadly accessible. / Szklarczyk, Damian; Morris, John H; Cook, Helen; Kuhn, Michael; Wyder, Stefan; Simonovic, Milan; Santos Delgado, Alberto; Doncheva, Nadezhda T; Roth, Alexander; Bork, Peer; Jensen, Lars J; von Mering, Christian.

      In: Nucleic Acids Research, Vol. 45, No. D1, 01.2017, p. D362-D368.

      Research output: Contribution to journalJournal articleResearchpeer-review

    ID: 161289218