Waves of sumoylation support transcription dynamics during adipocyte differentiation

Research output: Contribution to journal › Journal article › Research › peer-review

Standard

Waves of sumoylation support transcription dynamics during adipocyte differentiation. / Zhao, Xu; Hendriks, Ivo A.; Le Gras, Stephanie; Ye, Tao; Ramos-Alonso, Lucía; Nguea P, Aurelie; Lien, Guro Flor; Ghasemi, Fatemeh; Klungland, Arne; Jost, Bernard; Enserink, Jorrit M.; Nielsen, Michael L.; Chymkowitch, Pierre.

In: Nucleic Acids Research, Vol. 50, No. 3, 2022, p. 1351-1369.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Zhao, X, Hendriks, IA, Le Gras, S, Ye, T, Ramos-Alonso, L, Nguea P, A, Lien, GF, Ghasemi, F, Klungland, A, Jost, B, Enserink, JM, Nielsen, ML & Chymkowitch, P 2022, 'Waves of sumoylation support transcription dynamics during adipocyte differentiation', Nucleic Acids Research, vol. 50, no. 3, pp. 1351-1369. https://doi.org/10.1093/nar/gkac027

APA

Zhao, X., Hendriks, I. A., Le Gras, S., Ye, T., Ramos-Alonso, L., Nguea P, A., Lien, G. F., Ghasemi, F., Klungland, A., Jost, B., Enserink, J. M., Nielsen, M. L., & Chymkowitch, P. (2022). Waves of sumoylation support transcription dynamics during adipocyte differentiation. Nucleic Acids Research, 50(3), 1351-1369. https://doi.org/10.1093/nar/gkac027

Vancouver

Zhao X, Hendriks IA, Le Gras S, Ye T, Ramos-Alonso L, Nguea P A et al. Waves of sumoylation support transcription dynamics during adipocyte differentiation. Nucleic Acids Research. 2022;50(3):1351-1369. https://doi.org/10.1093/nar/gkac027

Author

Zhao, Xu ; Hendriks, Ivo A. ; Le Gras, Stephanie ; Ye, Tao ; Ramos-Alonso, Lucía ; Nguea P, Aurelie ; Lien, Guro Flor ; Ghasemi, Fatemeh ; Klungland, Arne ; Jost, Bernard ; Enserink, Jorrit M. ; Nielsen, Michael L. ; Chymkowitch, Pierre. / Waves of sumoylation support transcription dynamics during adipocyte differentiation. In: Nucleic Acids Research. 2022 ; Vol. 50, No. 3. pp. 1351-1369.

Bibtex

@article{80b57e6eea50456e9ef600ad9251fc20,
title = "Waves of sumoylation support transcription dynamics during adipocyte differentiation",
abstract = "Tight control of gene expression networks required for adipose tissue formation and plasticity is essential for adaptation to energy needs and environmental cues. However, the mechanisms that orchestrate the global and dramatic transcriptional changes leading to adipocyte differentiation remain to be fully unraveled. We investigated the regulation of nascent transcription by the sumoylation pathway during adipocyte differentiation using SLAMseq and ChIPseq. We discovered that the sumoylation pathway has a dual function in differentiation; it supports the initial downregulation of pre-Adipocyte-specific genes, while it promotes the establishment of the mature adipocyte transcriptional program. By characterizing endogenous sumoylome dynamics in differentiating adipocytes by mass spectrometry, we found that sumoylation of specific transcription factors like PPARγ/RXR and their co-factors are associated with the transcription of adipogenic genes. Finally, using RXR as a model, we found that sumoylation may regulate adipogenic transcription by supporting the chromatin occurrence of transcription factors. Our data demonstrate that the sumoylation pathway supports the rewiring of transcriptional networks required for formation of functional adipocytes. This study also provides the scientists in the field of cellular differentiation and development with an in-depth resource of the dynamics of the SUMO-chromatin landscape, SUMO-regulated transcription and endogenous sumoylation sites during adipocyte differentiation.",
author = "Xu Zhao and Hendriks, {Ivo A.} and {Le Gras}, Stephanie and Tao Ye and Luc{\'i}a Ramos-Alonso and {Nguea P}, Aurelie and Lien, {Guro Flor} and Fatemeh Ghasemi and Arne Klungland and Bernard Jost and Enserink, {Jorrit M.} and Nielsen, {Michael L.} and Pierre Chymkowitch",
note = "Publisher Copyright: {\textcopyright} 2022 The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.",
year = "2022",
doi = "10.1093/nar/gkac027",
language = "English",
volume = "50",
pages = "1351--1369",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "3",

}

RIS

TY - JOUR

T1 - Waves of sumoylation support transcription dynamics during adipocyte differentiation

AU - Zhao, Xu

AU - Hendriks, Ivo A.

AU - Le Gras, Stephanie

AU - Ye, Tao

AU - Ramos-Alonso, Lucía

AU - Nguea P, Aurelie

AU - Lien, Guro Flor

AU - Ghasemi, Fatemeh

AU - Klungland, Arne

AU - Jost, Bernard

AU - Enserink, Jorrit M.

AU - Nielsen, Michael L.

AU - Chymkowitch, Pierre

N1 - Publisher Copyright: © 2022 The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.

PY - 2022

Y1 - 2022

N2 - Tight control of gene expression networks required for adipose tissue formation and plasticity is essential for adaptation to energy needs and environmental cues. However, the mechanisms that orchestrate the global and dramatic transcriptional changes leading to adipocyte differentiation remain to be fully unraveled. We investigated the regulation of nascent transcription by the sumoylation pathway during adipocyte differentiation using SLAMseq and ChIPseq. We discovered that the sumoylation pathway has a dual function in differentiation; it supports the initial downregulation of pre-Adipocyte-specific genes, while it promotes the establishment of the mature adipocyte transcriptional program. By characterizing endogenous sumoylome dynamics in differentiating adipocytes by mass spectrometry, we found that sumoylation of specific transcription factors like PPARγ/RXR and their co-factors are associated with the transcription of adipogenic genes. Finally, using RXR as a model, we found that sumoylation may regulate adipogenic transcription by supporting the chromatin occurrence of transcription factors. Our data demonstrate that the sumoylation pathway supports the rewiring of transcriptional networks required for formation of functional adipocytes. This study also provides the scientists in the field of cellular differentiation and development with an in-depth resource of the dynamics of the SUMO-chromatin landscape, SUMO-regulated transcription and endogenous sumoylation sites during adipocyte differentiation.

AB - Tight control of gene expression networks required for adipose tissue formation and plasticity is essential for adaptation to energy needs and environmental cues. However, the mechanisms that orchestrate the global and dramatic transcriptional changes leading to adipocyte differentiation remain to be fully unraveled. We investigated the regulation of nascent transcription by the sumoylation pathway during adipocyte differentiation using SLAMseq and ChIPseq. We discovered that the sumoylation pathway has a dual function in differentiation; it supports the initial downregulation of pre-Adipocyte-specific genes, while it promotes the establishment of the mature adipocyte transcriptional program. By characterizing endogenous sumoylome dynamics in differentiating adipocytes by mass spectrometry, we found that sumoylation of specific transcription factors like PPARγ/RXR and their co-factors are associated with the transcription of adipogenic genes. Finally, using RXR as a model, we found that sumoylation may regulate adipogenic transcription by supporting the chromatin occurrence of transcription factors. Our data demonstrate that the sumoylation pathway supports the rewiring of transcriptional networks required for formation of functional adipocytes. This study also provides the scientists in the field of cellular differentiation and development with an in-depth resource of the dynamics of the SUMO-chromatin landscape, SUMO-regulated transcription and endogenous sumoylation sites during adipocyte differentiation.

U2 - 10.1093/nar/gkac027

DO - 10.1093/nar/gkac027

M3 - Journal article

C2 - 35100417

AN - SCOPUS:85126470768

VL - 50

SP - 1351

EP - 1369

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - 3

ER -

ID: 301460441