STRING 8--a global view on proteins and their functional interactions in 630 organisms

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STRING 8--a global view on proteins and their functional interactions in 630 organisms. / Jensen, Lars Juhl; Kuhn, Michael; Stark, Manuel; Chaffron, Samuel; Creevey, Chris; Muller, Jean; Doerks, Tobias; Julien, Philippe; Roth, Alexander; Simonovic, Milan; Bork, Peer; von Mering, Christian.

In: Nucleic Acids Research, Vol. 37, No. suppl 1, 2008, p. D412-D416.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Jensen, LJ, Kuhn, M, Stark, M, Chaffron, S, Creevey, C, Muller, J, Doerks, T, Julien, P, Roth, A, Simonovic, M, Bork, P & von Mering, C 2008, 'STRING 8--a global view on proteins and their functional interactions in 630 organisms', Nucleic Acids Research, vol. 37, no. suppl 1, pp. D412-D416. https://doi.org/10.1093/nar/gkn760

APA

Jensen, L. J., Kuhn, M., Stark, M., Chaffron, S., Creevey, C., Muller, J., Doerks, T., Julien, P., Roth, A., Simonovic, M., Bork, P., & von Mering, C. (2008). STRING 8--a global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Research, 37(suppl 1), D412-D416. https://doi.org/10.1093/nar/gkn760

Vancouver

Jensen LJ, Kuhn M, Stark M, Chaffron S, Creevey C, Muller J et al. STRING 8--a global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Research. 2008;37(suppl 1):D412-D416. https://doi.org/10.1093/nar/gkn760

Author

Jensen, Lars Juhl ; Kuhn, Michael ; Stark, Manuel ; Chaffron, Samuel ; Creevey, Chris ; Muller, Jean ; Doerks, Tobias ; Julien, Philippe ; Roth, Alexander ; Simonovic, Milan ; Bork, Peer ; von Mering, Christian. / STRING 8--a global view on proteins and their functional interactions in 630 organisms. In: Nucleic Acids Research. 2008 ; Vol. 37, No. suppl 1. pp. D412-D416.

Bibtex

@article{19e5d6407de511df928f000ea68e967b,
title = "STRING 8--a global view on proteins and their functional interactions in 630 organisms",
abstract = "Functional partnerships between proteins are at the core of complex cellular phenotypes, and the networks formed by interacting proteins provide researchers with crucial scaffolds for modeling, data reduction and annotation. STRING is a database and web resource dedicated to protein-protein interactions, including both physical and functional interactions. It weights and integrates information from numerous sources, including experimental repositories, computational prediction methods and public text collections, thus acting as a meta-database that maps all interaction evidence onto a common set of genomes and proteins. The most important new developments in STRING 8 over previous releases include a URL-based programming interface, which can be used to query STRING from other resources, improved interaction prediction via genomic neighborhood in prokaryotes, and the inclusion of protein structures. Version 8.0 of STRING covers about 2.5 million proteins from 630 organisms, providing the most comprehensive view on protein-protein interactions currently available. STRING can be reached at http://string-db.org/.",
author = "Jensen, {Lars Juhl} and Michael Kuhn and Manuel Stark and Samuel Chaffron and Chris Creevey and Jean Muller and Tobias Doerks and Philippe Julien and Alexander Roth and Milan Simonovic and Peer Bork and {von Mering}, Christian",
note = "Keywords: Databases, Protein; Genomics; Multiprotein Complexes; Protein Interaction Mapping; Proteins; User-Computer Interface",
year = "2008",
doi = "10.1093/nar/gkn760",
language = "English",
volume = "37",
pages = "D412--D416",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "suppl 1",

}

RIS

TY - JOUR

T1 - STRING 8--a global view on proteins and their functional interactions in 630 organisms

AU - Jensen, Lars Juhl

AU - Kuhn, Michael

AU - Stark, Manuel

AU - Chaffron, Samuel

AU - Creevey, Chris

AU - Muller, Jean

AU - Doerks, Tobias

AU - Julien, Philippe

AU - Roth, Alexander

AU - Simonovic, Milan

AU - Bork, Peer

AU - von Mering, Christian

N1 - Keywords: Databases, Protein; Genomics; Multiprotein Complexes; Protein Interaction Mapping; Proteins; User-Computer Interface

PY - 2008

Y1 - 2008

N2 - Functional partnerships between proteins are at the core of complex cellular phenotypes, and the networks formed by interacting proteins provide researchers with crucial scaffolds for modeling, data reduction and annotation. STRING is a database and web resource dedicated to protein-protein interactions, including both physical and functional interactions. It weights and integrates information from numerous sources, including experimental repositories, computational prediction methods and public text collections, thus acting as a meta-database that maps all interaction evidence onto a common set of genomes and proteins. The most important new developments in STRING 8 over previous releases include a URL-based programming interface, which can be used to query STRING from other resources, improved interaction prediction via genomic neighborhood in prokaryotes, and the inclusion of protein structures. Version 8.0 of STRING covers about 2.5 million proteins from 630 organisms, providing the most comprehensive view on protein-protein interactions currently available. STRING can be reached at http://string-db.org/.

AB - Functional partnerships between proteins are at the core of complex cellular phenotypes, and the networks formed by interacting proteins provide researchers with crucial scaffolds for modeling, data reduction and annotation. STRING is a database and web resource dedicated to protein-protein interactions, including both physical and functional interactions. It weights and integrates information from numerous sources, including experimental repositories, computational prediction methods and public text collections, thus acting as a meta-database that maps all interaction evidence onto a common set of genomes and proteins. The most important new developments in STRING 8 over previous releases include a URL-based programming interface, which can be used to query STRING from other resources, improved interaction prediction via genomic neighborhood in prokaryotes, and the inclusion of protein structures. Version 8.0 of STRING covers about 2.5 million proteins from 630 organisms, providing the most comprehensive view on protein-protein interactions currently available. STRING can be reached at http://string-db.org/.

U2 - 10.1093/nar/gkn760

DO - 10.1093/nar/gkn760

M3 - Journal article

C2 - 18940858

VL - 37

SP - D412-D416

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - suppl 1

ER -

ID: 20418871