Lars Juhl Jensen
Professor, Group Leader, Professor
Jensen Group
Blegdamsvej 3, 2200 København N., 06 Bygning 6, Building: 06-2-26
Member of:
- 2005
Large-scale extraction of gene regulation for model organisms in an ontological context
Saric, J., Jensen, Lars Juhl & Rojas, I., 2005, In: In Silico Biology. 5, 1, p. 21-32 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
Re-analysis of data and its integration
Jensen, Lars Juhl & Steinmetz, L. M., 2005, In: F E B S Letters. 579, 8, p. 1802-7 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
STRING: known and predicted protein-protein associations, integrated and transferred across organisms
von Mering, C., Jensen, Lars Juhl, Snel, B., Hooper, S. D., Krupp, M., Foglierini, M., Jouffre, N., Huynen, M. A. & Bork, P., 2005, In: Nucleic Acids Research. 33, Database issue, p. D433-7Research output: Contribution to journal › Journal article › Research › peer-review
Spore number control and breeding in saccharomyces cerevisiae a key role for a self-organixzing system
Taxis, C., Kavagiou, Z., Keller, P., Jensen, Lars Juhl, Colombelli, J., Bork, P., Stelzer, E. H. K. & Knop, M., 2005, In: Journal of Cell Biology. 171, p. 627-640Research output: Contribution to journal › Journal article › Research › peer-review
Systematic association of genes to phenotypes by genome and literature mining
Korbel, J. O., Doerks, T., Jensen, Lars Juhl, Perez-Iratxeta, C., Kaczanowski, S., Hooper, S. D., Andrade, M. A. & Bork, P., 2005, In: P L o S Biology (Online). 3, 5, p. e134Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
Assessing systems properties of yeast mitochondria through an interaction map of the organelle
Perocchi, F., Jensen, Lars Juhl, Gagneur, J., Ahting, U., von Mering, C., Bork, P., Prokisch, H. & Steinmetz, L. M., 2006, In: P L o S Genetics (Online). 2, 10, p. e170Research output: Contribution to journal › Journal article › Research › peer-review
Co-evolution of transcriptional and post-translational cell-cycle regulation
Jensen, Lars Juhl, Jensen, T. S., de Lichtenberg, U., Brunak, S. & Bork, P., 2006, In: Nature Study. 443, 7111, p. 594-7 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
Extraction of regulatory gene/protein networks from Medline
Saric, J., Jensen, Lars Juhl, Ouzounova, R., Rojas, I. & Bork, P., 2006, In: Bioinformatics. 22, 6, p. 645-50 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
Identification and analysis of evolutionarily cohesive functional modules in protein networks
Campillos, M., von Mering, C., Jensen, Lars Juhl & Bork, P., 2006, In: Genome Research. 16, 3, p. 374-82 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
Literature mining for the biologist: from information retrieval to biological discovery
Jensen, Lars Juhl, Saric, J. & Bork, P., 2006, In: Nature Reviews. Genetics. 7, 2, p. 119-29 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
Origin of replication in circular prokaryotic chromosomes
Worning, P., Jensen, Lars Juhl, Hallin, P. F., Staerfeldt, H. & Ussery, D., 2006, In: Environmental Microbiology. 8, 2, p. 353-61 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
Proteome survey reveals modularity of the yeast cell machinery
Gavin, A-C., Aloy, P., Grandi, P., Krause, R., Boesche, M., Marzioch, M., Rau, C., Jensen, L. J., Bastuck, S., Dümpelfeld, B., Edelmann, A., Heurtier, M-A., Hoffman, V., Hoefert, C., Klein, K., Hudak, M., Michon, A-M., Schelder, M., Schirle, M., Remor, M. & 12 others, , 2006, In: Nature Study. 440, 7084, p. 631-6 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
The more the merrier: comparative analysis of microarray studies on cell cycle-regulated genes in fission yeast
Marguerat, S., Jensen, T. S., de Lichtenberg, U., Wilhelm, B. T., Jensen, Lars Juhl & Bähler, J., 2006, In: Yeast (Chichester, England). 23, 4, p. 261-77 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2007
Evolution of cell cycle control: same molecular machines, different regulation
de Lichtenberg, U., Jensen, T. S., Brunak, S., Bork, P. & Jensen, Lars Juhl, 2007, In: Cell Cycle. 6, 15, p. 1819-25 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis
Hooper, S. D., Boué, S., Krause, R., Jensen, Lars Juhl, Mason, C. E., Ghanim, M., White, K. P., Furlong, E. E. M. & Bork, P., 2007, In: Molecular Systems Biology. 3, p. 72Research output: Contribution to journal › Journal article › Research › peer-review
Quantitative assessment of protein function prediction from metagenomics shotgun sequences
Harrington, E. D., Singh, A., Doerks, T., Letunic, I., von Mering, C., Jensen, Lars Juhl, Raes, J. & Bork, P., 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 35, p. 13913-8 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
Quantitative phylogenetic assessment of microbial communities in diverse environments
von Mering, C., Hugenholtz, P., Raes, J., Tringe, S. G., Doerks, T., Jensen, Lars Juhl, Ward, N. & Bork, P., 2007, In: Science (New York, N.Y.). 315, 5815, p. 1126-30 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
STRING 7--recent developments in the integration and prediction of protein interactions
von Mering, C., Jensen, Lars Juhl, Kuhn, M., Chaffron, S., Doerks, T., Krüger, B., Snel, B. & Bork, P., 2007, In: Nucleic Acids Research. 35, Database issue, p. D358-62Research output: Contribution to journal › Journal article › Research › peer-review
Systematic discovery of in vivo phosphorylation networks
Linding, R., Jensen, L. J., Ostheimer, G. J., van Vugt, M. A. T. M., Jørgensen, C., Miron, I. M., Diella, F., Colwill, K., Taylor, L., Elder, K., Metalnikov, P., Nguyen, V., Pasculescu, A., Jin, J., Park, J. G., Samson, L. D., Woodgett, J. R., Russell, R. B., Bork, P., Yaffe, M. B. & 1 others, , 2007, In: Cell. 129, 7, p. 1415-26 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2008
- Published
Circular reasoning rather than cyclic expression
Jensen, Lars Juhl, de Lichtenberg, U., Jensen, T. S., Brunak, Søren & Bork, P., 2008, In: Genome Biology. 9, 6, p. 403Research output: Contribution to journal › Journal article › Research › peer-review
Cyclebase.org--a comprehensive multi-organism online database of cell-cycle experiments
Gauthier, N. P., Larsen, M. E., Wernersson, R., de Lichtenberg, U., Jensen, Lars Juhl, Brunak, S. & Jensen, T. S., 2008, In: Nucleic Acids Research. 36, Database issue, p. D854-9Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drug target identification using side-effect similarity
Campillos, M., Kuhn, M., Gavin, A., Jensen, Lars Juhl & Bork, P., 2008, In: Science. 321, 5886, p. 263-6 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
Enhanced function annotations for Drosophila serine proteases: a case study for systematic annotation of multi-member gene families
Shah, P. K., Tripathi, L. P., Jensen, Lars Juhl, Gahnim, M., Mason, C., Furlong, E. E., Rodrigues, V., White, K. P., Bork, P. & Sowdhamini, R., 2008, In: Gene. 407, 1-2, p. 199-215 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Large-scale prediction of drug-target relationships
Kuhn, M., Campillos, M., González, P., Jensen, Lars Juhl & Bork, P., 2008, In: F E B S Letters. 582, 8, p. 1283-90 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Linear motif atlas for phosphorylation-dependent signaling
Miller, M. L., Jensen, L. J., Diella, F., Jørgensen, C., Tinti, M., Li, L., Hsiung, M., Parker, S. A., Bordeaux, J., Sicheritz-Ponten, T., Olhovsky, M., Pasculescu, A., Alexander, J., Knapp, S., Blom, N., Bork, P., Li, S., Cesareni, G., Pawson, T., Turk, B. E. & 3 others, , 2008, In: Science Signaling. 1, 35, p. ra2Research output: Contribution to journal › Journal article › Research › peer-review
ID: 9931112
Most downloads
-
713
downloads
TISSUES 2.0: an integrative web resource on mammalian tissue expression
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
514
downloads
STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
473
downloads
Drug target ontology to classify and integrate drug discovery data
Research output: Contribution to journal › Journal article › Research › peer-review
Published