Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Standard

Combing the Hairball : Improving Visualization of miRNA-Target Interaction Networks. / Russo, Francesco; Hu, Jessica Xin; Romero Herrera, Jose Alejandro; Brunak, Søren.

MicroRNA Target Identification: Methods and Protocols. ed. / Alessandro Laganà. Humana Press, 2019. p. 279-289 (Methods in Molecular Biology, Vol. 1970).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Harvard

Russo, F, Hu, JX, Romero Herrera, JA & Brunak, S 2019, Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks. in A Laganà (ed.), MicroRNA Target Identification: Methods and Protocols. Humana Press, Methods in Molecular Biology, vol. 1970, pp. 279-289. https://doi.org/10.1007/978-1-4939-9207-2_15

APA

Russo, F., Hu, J. X., Romero Herrera, J. A., & Brunak, S. (2019). Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks. In A. Laganà (Ed.), MicroRNA Target Identification: Methods and Protocols (pp. 279-289). Humana Press. Methods in Molecular Biology Vol. 1970 https://doi.org/10.1007/978-1-4939-9207-2_15

Vancouver

Russo F, Hu JX, Romero Herrera JA, Brunak S. Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks. In Laganà A, editor, MicroRNA Target Identification: Methods and Protocols. Humana Press. 2019. p. 279-289. (Methods in Molecular Biology, Vol. 1970). https://doi.org/10.1007/978-1-4939-9207-2_15

Author

Russo, Francesco ; Hu, Jessica Xin ; Romero Herrera, Jose Alejandro ; Brunak, Søren. / Combing the Hairball : Improving Visualization of miRNA-Target Interaction Networks. MicroRNA Target Identification: Methods and Protocols. editor / Alessandro Laganà. Humana Press, 2019. pp. 279-289 (Methods in Molecular Biology, Vol. 1970).

Bibtex

@inbook{93c605d6bfe94a22909e427ffb12bb9d,
title = "Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks",
abstract = "The visualization of regulatory networks is becoming increasingly important in order to understand molecular mechanisms and diseases. MicroRNAs (miRNAs) are small noncoding RNAs (ncRNAs) responsible of the post-transcriptional regulation of messenger RNAs (mRNAs) and other ncRNAs. MiRNAs are involved in numerous biological processes including development, cell proliferation, and apoptosis. They are also key molecules in major complex diseases such as cancer and cardiovascular diseases. A single miRNA can regulate many targets, making the analysis and visualization of these complex networks challenging. Here, we present standard and advanced visualization approaches to represent networks with a special focus on miRNA-target interactions.",
author = "Francesco Russo and Hu, {Jessica Xin} and {Romero Herrera}, {Jose Alejandro} and S{\o}ren Brunak",
year = "2019",
doi = "10.1007/978-1-4939-9207-2_15",
language = "English",
isbn = "978-1-4939-9206-5",
series = "Methods in Molecular Biology",
publisher = "Humana Press",
pages = "279--289",
editor = "Alessandro Lagan{\`a}",
booktitle = "MicroRNA Target Identification",
address = "United States",

}

RIS

TY - CHAP

T1 - Combing the Hairball

T2 - Improving Visualization of miRNA-Target Interaction Networks

AU - Russo, Francesco

AU - Hu, Jessica Xin

AU - Romero Herrera, Jose Alejandro

AU - Brunak, Søren

PY - 2019

Y1 - 2019

N2 - The visualization of regulatory networks is becoming increasingly important in order to understand molecular mechanisms and diseases. MicroRNAs (miRNAs) are small noncoding RNAs (ncRNAs) responsible of the post-transcriptional regulation of messenger RNAs (mRNAs) and other ncRNAs. MiRNAs are involved in numerous biological processes including development, cell proliferation, and apoptosis. They are also key molecules in major complex diseases such as cancer and cardiovascular diseases. A single miRNA can regulate many targets, making the analysis and visualization of these complex networks challenging. Here, we present standard and advanced visualization approaches to represent networks with a special focus on miRNA-target interactions.

AB - The visualization of regulatory networks is becoming increasingly important in order to understand molecular mechanisms and diseases. MicroRNAs (miRNAs) are small noncoding RNAs (ncRNAs) responsible of the post-transcriptional regulation of messenger RNAs (mRNAs) and other ncRNAs. MiRNAs are involved in numerous biological processes including development, cell proliferation, and apoptosis. They are also key molecules in major complex diseases such as cancer and cardiovascular diseases. A single miRNA can regulate many targets, making the analysis and visualization of these complex networks challenging. Here, we present standard and advanced visualization approaches to represent networks with a special focus on miRNA-target interactions.

U2 - 10.1007/978-1-4939-9207-2_15

DO - 10.1007/978-1-4939-9207-2_15

M3 - Book chapter

C2 - 30963498

SN - 978-1-4939-9206-5

T3 - Methods in Molecular Biology

SP - 279

EP - 289

BT - MicroRNA Target Identification

A2 - Laganà, Alessandro

PB - Humana Press

ER -

ID: 224024363