Rebecca Kirsch

Rebecca Kirsch

Postdoc


Publication year:
  1. 2023
  2. Published

    eggNOG 6.0: enabling comparative genomics across 12 535 organisms

    Hernández-Plaza, A., Szklarczyk, D., Botas, J., Cantalapiedra, C. P., Giner-Lamia, J., Mende, D. R., Kirsch, Rebecca, Rattei, T., Letunic, I., Jensen, Lars Juhl, Bork, P., von Mering, C. & Huerta-Cepas, J., 2023, In: Nucleic Acids Research. 51, D1, p. D389-D394 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2022
  4. Accepted/In press

    Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks

    Doncheva, Nadezhda Tsankova, Morris, J. H., Holze, Henrietta, Kirsch, Rebecca, Nastou, Katerina, Cuesta-Astroz, Y., Rattei, T., Szklarczyk, D., Von Mering, C. & Jensen, Lars Juhl, 2022, (Accepted/In press) In: Journal of Proteome Research.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. E-pub ahead of print

    Exploration of Protein Posttranslational Modification Landscape and Cross Talk with CrossTalkMapper

    Grimaud, A., Haugaard Holck, F., Buur, L. M., Kirsch, Rebecca & Schwämmle, V., 2022, (E-pub ahead of print) Methods in Molecular Biology. Humana Press, (Methods in Molecular Biology, Vol. 2499).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  6. E-pub ahead of print

    The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest

    Szklarczyk, D., Kirsch, Rebecca, Koutrouli, Mikaela, Nastou, Katerina, Mehryary, F., Hachilif, R., Gable, A. L., Fang, T., Doncheva, Nadezhda Tsankova, Pyysalo, S., Bork, P., Jensen, Lars Juhl & von Mering, C., 2022, (E-pub ahead of print) In: Nucleic Acids Research.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2021
  8. Published

    The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets

    Szklarczyk, D., Gable, A. L., Nastou, Katerina, Lyon, D., Kirsch, Rebecca, Pyysalo, S., Doncheva, Nadezhda Tsankova, Legeay, M., Fang, T., Bork, P., Jensen, Lars Juhl & von Mering, C., 2021, In: Nucleic Acids Symposium Series. 49, D1, p. D605-D612 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. 2018
  10. Published

    Identification and characterization of novel conserved RNA structures in Drosophila

    Kirsch, Rebecca, Seemann, Ernst Stefan, Ruzzo, W. L., Cohen, S. M., Stadler, P. F. & Gorodkin, Jan, 2018, In: BMC Genomics. 19, 20 p., 899.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 117756097