Tools and data services registry: a community effort to document bioinformatics resources
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Tools and data services registry : a community effort to document bioinformatics resources. / Ison, Jon; Rapacki, Kristoffer; Ménager, Hervé; Kalaš, Matúš; Rydza, Emil; Chmura, Piotr; Anthon, Christian; Beard, Niall; Berka, Karel; Bolser, Dan; Booth, Tim; Bretaudeau, Anthony; Brezovsky, Jan; Casadio, Rita; Cesareni, Gianni; Coppens, Frederik; Cornell, Michael; Cuccuru, Gianmauro; Davidsen, Kristian; Vedova, Gianluca Della; Dogan, Tunca; Doppelt-Azeroual, Olivia; Emery, Laura; Gasteiger, Elisabeth; Gatter, Thomas; Goldberg, Tatyana; Grosjean, Marie; Grüning, Björn; Helmer-Citterich, Manuela; Ienasescu, Hans-Ioan; Ioannidis, Vassilios; Jespersen, Martin Closter; Jimenez, Rafael; Juty, Nick; Juvan, Peter; Koch, Maximilian; Laibe, Camille; Li, Jing-Woei; Licata, Luana; Mareuil, Fabien; Mičetić, Ivan; Friborg, Rune Møllegaard; Moretti, Sebastien; Morris, Chris; Möller, Steffen; Nenadic, Aleksandra; Peterson, Hedi; Profiti, Giuseppe; Rice, Peter; Romano, Paolo; Roncaglia, Paola; Saidi, Rabie; Schafferhans, Andrea; Schwämmle, Veit; Smith, Callum; Sperotto, Maria Maddalena; Stockinger, Heinz; Vařeková, Radka Svobodová; Tosatto, Silvio C. E.; de la Torre, Victor; Uva, Paolo; Via, Allegra; Yachdav, Guy; Zambelli, Federico; Vriend, Gert; Rost, Burkhard; Parkinson, Helen; Løngreen, Peter; Brunak, Søren.
In: Nucleic Acids Research, Vol. 44, No. D1, 2016, p. D38-D47.Research output: Contribution to journal › Journal article › Research › peer-review
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TY - JOUR
T1 - Tools and data services registry
T2 - a community effort to document bioinformatics resources
AU - Ison, Jon
AU - Rapacki, Kristoffer
AU - Ménager, Hervé
AU - Kalaš, Matúš
AU - Rydza, Emil
AU - Chmura, Piotr
AU - Anthon, Christian
AU - Beard, Niall
AU - Berka, Karel
AU - Bolser, Dan
AU - Booth, Tim
AU - Bretaudeau, Anthony
AU - Brezovsky, Jan
AU - Casadio, Rita
AU - Cesareni, Gianni
AU - Coppens, Frederik
AU - Cornell, Michael
AU - Cuccuru, Gianmauro
AU - Davidsen, Kristian
AU - Vedova, Gianluca Della
AU - Dogan, Tunca
AU - Doppelt-Azeroual, Olivia
AU - Emery, Laura
AU - Gasteiger, Elisabeth
AU - Gatter, Thomas
AU - Goldberg, Tatyana
AU - Grosjean, Marie
AU - Grüning, Björn
AU - Helmer-Citterich, Manuela
AU - Ienasescu, Hans-Ioan
AU - Ioannidis, Vassilios
AU - Jespersen, Martin Closter
AU - Jimenez, Rafael
AU - Juty, Nick
AU - Juvan, Peter
AU - Koch, Maximilian
AU - Laibe, Camille
AU - Li, Jing-Woei
AU - Licata, Luana
AU - Mareuil, Fabien
AU - Mičetić, Ivan
AU - Friborg, Rune Møllegaard
AU - Moretti, Sebastien
AU - Morris, Chris
AU - Möller, Steffen
AU - Nenadic, Aleksandra
AU - Peterson, Hedi
AU - Profiti, Giuseppe
AU - Rice, Peter
AU - Romano, Paolo
AU - Roncaglia, Paola
AU - Saidi, Rabie
AU - Schafferhans, Andrea
AU - Schwämmle, Veit
AU - Smith, Callum
AU - Sperotto, Maria Maddalena
AU - Stockinger, Heinz
AU - Vařeková, Radka Svobodová
AU - Tosatto, Silvio C. E.
AU - de la Torre, Victor
AU - Uva, Paolo
AU - Via, Allegra
AU - Yachdav, Guy
AU - Zambelli, Federico
AU - Vriend, Gert
AU - Rost, Burkhard
AU - Parkinson, Helen
AU - Løngreen, Peter
AU - Brunak, Søren
N1 - © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.
PY - 2016
Y1 - 2016
N2 - Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to improvement in human health, agriculture and the environment. In support of these discoveries, a plethora of databases and tools are deployed, in technically complex and diverse implementations, across a spectrum of scientific disciplines. The corpus of documentation of these resources is fragmented across the Web, with much redundancy, and has lacked a common standard of information. The outcome is that scientists must often struggle to find, understand, compare and use the best resources for the task at hand.Here we present a community-driven curation effort, supported by ELIXIR-the European infrastructure for biological information-that aspires to a comprehensive and consistent registry of information about bioinformatics resources. The sustainable upkeep of this Tools and Data Services Registry is assured by a curation effort driven by and tailored to local needs, and shared amongst a network of engaged partners.As of November 2015, the registry includes 1785 resources, with depositions from 126 individual registrations including 52 institutional providers and 74 individuals. With community support, the registry can become a standard for dissemination of information about bioinformatics resources: we welcome everyone to join us in this common endeavour. The registry is freely available at https://bio.tools.
AB - Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to improvement in human health, agriculture and the environment. In support of these discoveries, a plethora of databases and tools are deployed, in technically complex and diverse implementations, across a spectrum of scientific disciplines. The corpus of documentation of these resources is fragmented across the Web, with much redundancy, and has lacked a common standard of information. The outcome is that scientists must often struggle to find, understand, compare and use the best resources for the task at hand.Here we present a community-driven curation effort, supported by ELIXIR-the European infrastructure for biological information-that aspires to a comprehensive and consistent registry of information about bioinformatics resources. The sustainable upkeep of this Tools and Data Services Registry is assured by a curation effort driven by and tailored to local needs, and shared amongst a network of engaged partners.As of November 2015, the registry includes 1785 resources, with depositions from 126 individual registrations including 52 institutional providers and 74 individuals. With community support, the registry can become a standard for dissemination of information about bioinformatics resources: we welcome everyone to join us in this common endeavour. The registry is freely available at https://bio.tools.
U2 - 10.1093/nar/gkv1116
DO - 10.1093/nar/gkv1116
M3 - Journal article
C2 - 26538599
VL - 44
SP - D38-D47
JO - Nucleic Acids Research
JF - Nucleic Acids Research
SN - 0305-1048
IS - D1
ER -
ID: 159214620