Søren Brunak

Søren Brunak

Professor


  1. 2007
  2. The implications of alternative splicing in the ENCODE protein complement

    Tress, M. L., Martelli, P. L., Frankish, A., Reeves, G. A., Wesselink, J. J., Yeats, C., Olason, P. I., Albrecht, M., Hegyi, H., Giorgetti, A., Raimondo, D., Lagarde, J., Laskowski, R. A., López, G., Sadowski, M. I., Watson, J. D., Fariselli, P., Rossi, I., Nagy, A., Kai, W. & 26 others, Størling, Z., Orsini, M., Assenov, Y., Blankenburg, H., Huthmacher, C., Ramírez, F., Schlicker, A., Denoeud, F., Jones, P., Kerrien, S., Orchard, S., Antonarakis, S. E., Reymond, A., Birney, E., Brunak, Søren, Casadio, R., Guigo, R., Harrow, J., Hermjakob, H., Jones, D. T., Lengauer, T., Orengo, C. A., Patthy, L., Thornton, J. M., Tramontano, A. & Valencia, A., 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 13, p. 5495-500 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2006
  4. Co-evolution of transcriptional and post-translational cell-cycle regulation

    Jensen, L. J., Jensen, T. S., de Lichtenberg, U., Brunak, Søren & Bork, P., 2006, In: Nature Study. 443, 7111, p. 594-7 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae

    Regenberg, Birgitte, Grotkjaer, T., Winther, Ole, Fausbøll, A., Akesson, M., Bro, C., Hansen, L. K., Brunak, Søren & Nielsen, Jens Bo, 2006, In: Genome Biology (Online Edition). 7, 11, p. R107

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Modelling the human immune system by combining bioinformatics and systems biology approaches

    Rapin, N., Kesmir, C., Frankild, S., Nielsen, M., Lundegaard, C., Brunak, Søren & Lund, O., 2006, In: Journal of Biological Physics. 32, 3-4, p. 335-53 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2005
  8. Comparison of computational methods for the identification of cell cycle-regulated genes

    de Lichtenberg, U., Jensen, L. J., Fausbøll, A., Jensen, T. S., Bork, P. & Brunak, Søren, 2005, In: Bioinformatics. 21, 7, p. 1164-71 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Dynamic complex formation during the yeast cell cycle

    de Lichtenberg, U., Jensen, L. J., Brunak, Søren & Bork, P., 2005, In: Science (New York, N.Y.). 307, 5710, p. 724-7 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Prediction methods and databases within chemoinformatics: emphasis on drugs and drug candidates

    Jónsdóttir, S. O., Jørgensen, Flemming Steen & Brunak, Søren, 2005, In: Bioinformatics. 21, 10, p. 2145-60 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. 2003
  12. Functionality of system components: conservation of protein function in protein feature space

    Jensen, L. J., Ussery, D. & Brunak, Søren, 2003, In: Genome Research. 13, 11, p. 2444-9 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Protein feature based identification of cell cycle regulated proteins in yeast

    de Lichtenberg, U., Jensen, T. S., Jensen, L. J. & Brunak, Søren, 2003, In: Journal of Molecular Biology. 329, 4, p. 663-74 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. 2002
  15. The atlas visualisation of genome-wide information

    Skovgaard, M., Jensen, L. J., Friis, C., Stærfeldt, H. H., Worning, P., Brunak, Søren & Ussery, D. W., 2002, Methods in Microbiology. Vol. 33. p. 49-63

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

ID: 12895347