Lars Juhl Jensen

Lars Juhl Jensen

professor, group leader


  1. 2022
  2. Published

    A Workflow of Integrated Resources to Catalyze Network Pharmacology Driven COVID-19 Research

    Zahoránszky-Kőhalmi, G., Siramshetty, V. B., Kumar, P., Gurumurthy, M., Grillo, B., Mathew, B., Metaxatos, D., Backus, M., Mierzwa, T., Simon, R., Grishagin, I., Brovold, L., Mathé, E. A., Hall, M. D., Michael, S. G., Godfrey, A. G., Mestres, J., Jensen, Lars Juhl & Oprea, T. I., 2022, In: Journal of Chemical Information and Modeling. 62, 3, p. 718-729

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A knowledge graph to interpret clinical proteomics data

    Santos Delgado, Alberto, Colaço, A. R., Nielsen, Annelaura Bach, Niu, Lili, Strauss, Maximilian, Geyer, P. E., Coscia, F., Albrechtsen, Nicolai Jacob Wewer, Mundt, F., Jensen, Lars Juhl & Mann, Matthias, 2022, In: Nature Biotechnology. 40, p. 692–702

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. E-pub ahead of print

    Diseases 2.0: a weekly updated database of disease-gene associations from text mining and data integration

    Grissa, Dhouha, Junge, A., Oprea, T. I. & Jensen, Lars Juhl, 2022, (E-pub ahead of print) In: Database : the journal of biological databases and curation.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types

    Zafeiropoulos, H., Paragkamian, S., Ninidakis, S., Pavlopoulos, G. A., Jensen, Lars Juhl & Pafilis, E., 2022, In: Microorganisms. 10, 2, 22 p., 293.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Phosphorylation of SHP2 at Tyr62 enables acquired resistance to SHP2 allosteric inhibitors in FLT3-ITD-driven AML

    Pfeiffer, Anamarija, Franciosa, Giulia, Locard-Paulet, Marie, Piga, I., Reckzeh, Kristian, Vemulapalli, V., Blacklow, S. C., Theilgaard-Mønch, Kim, Jensen, Lars Juhl & Olsen, Jesper Velgaard, 2022, In: Cancer Research. 82, 11, p. 2141-2155 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2021
  8. Published

    Homology-directed repair protects the replicating genome from metabolic assaults

    Somyajit, K., Spies, J., Coscia, F., Kirik, U., Rask, M., Lee, J., Neelsen, K. J., Mund, Andreas, Jensen, Lars Juhl, Paull, T. T., Mann, Matthias & Lukas, Jiri, 2021, In: Developmental Cell. 56, 4, p. 461-477.e7

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Human pathways in animal models: possibilities and limitations

    Doncheva, Nadezhda Tsankova, Palasca, Oana, Yarani, R., Litman, Thomas, Anthon, Christian, Groenen, M. A. M., Stadler, P. F., Pociot, Flemming, Jensen, Lars Juhl & Gorodkin, Jan, 2021, In: Nucleic Acids Research. 49, 4, p. 1859-1871 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Improved metagenome binning and assembly using deep variational autoencoders

    Nissen, J. N., Johansen, Joachim, Allesoe, R. L., Sonderby, C. K., Armenteros, J. J. A., Grønbech, Christopher Heje, Jensen, Lars Juhl, Nielsen, H. B., Petersen, T. N., Winther, Ole & Rasmussen, Simon, 2021, In: Nature Biotechnology. 39, p. 555-560

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    OnTheFly2.0: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis

    Baltoumas, F. A., Zafeiropoulou, S., Karatzas, E., Paragkamian, S., Thanati, F., Iliopoulos, I., Eliopoulos, A. G., Schneider, R., Jensen, Lars Juhl, Pafilis, E. & Pavlopoulos, G. A., 2021, In: NAR Genomics and Bioinformatics. 3, 4, 10 p., lqab090.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Quantitative proteome comparison of human hearts with those of model organisms

    Linscheid, N., Santos Delgado, Alberto, Poulsen, P. C., Mills, Robert William, Callø, Kirstine, Leurs, U., Ye, J. Z., Stolte, C., Thomsen, Morten Bækgaard, Bentzen, Bo Hjorth, Lundegaard, Pia Rengtved, Olesen, Morten Steen Salling, Jensen, Lars Juhl, Olsen, Jesper Velgaard & Lundby, Alicia, 2021, In: PLOS Biology. 19, 4, 22 p., e3001144.

    Research output: Contribution to journalJournal articleResearchpeer-review

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