Comparison of electron capture dissociation and collisionally activated dissociation of polycations of peptide nucleic acids
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Comparison of electron capture dissociation and collisionally activated dissociation of polycations of peptide nucleic acids. / Olsen, Jesper Velgaard; Haselmann, K F; Nielsen, Michael Lund; Budnik, B A; Nielsen, Peter E.; Zubarev, R A.
In: Rapid Communications in Mass Spectrometry, Vol. 15, No. 12, 2001, p. 969-74.Research output: Contribution to journal › Journal article › Research › peer-review
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TY - JOUR
T1 - Comparison of electron capture dissociation and collisionally activated dissociation of polycations of peptide nucleic acids
AU - Olsen, Jesper Velgaard
AU - Haselmann, K F
AU - Nielsen, Michael Lund
AU - Budnik, B A
AU - Nielsen, Peter E.
AU - Zubarev, R A
N1 - Keywords: Cations; Cyclotrons; Fourier Analysis; Nucleic Acids; Peptides; Spectrometry, Mass, Electrospray Ionization
PY - 2001
Y1 - 2001
N2 - Electron capture dissociation (ECD) in Fourier transform ion cyclotron resonance mass spectrometry coupled with electrospray ionization enhances the sequence elucidation of peptide nucleic acids compared with conventional low-energy collisionally activated dissociation (CAD). Examples are shown where ECD produced complete or extensive sequence coverage in PNAs six to ten nucleobases long. However, facile base losses from the reduced species and low abundances of backbone ECD fragments presented a significant problem. This was rationalized through the lower degree of charge solvation on the backbone compared to polypeptides. Combination of both CAD and ECD data is advantageous, as these techniques produce cleavages at different sites.
AB - Electron capture dissociation (ECD) in Fourier transform ion cyclotron resonance mass spectrometry coupled with electrospray ionization enhances the sequence elucidation of peptide nucleic acids compared with conventional low-energy collisionally activated dissociation (CAD). Examples are shown where ECD produced complete or extensive sequence coverage in PNAs six to ten nucleobases long. However, facile base losses from the reduced species and low abundances of backbone ECD fragments presented a significant problem. This was rationalized through the lower degree of charge solvation on the backbone compared to polypeptides. Combination of both CAD and ECD data is advantageous, as these techniques produce cleavages at different sites.
U2 - 10.1002/rcm.317
DO - 10.1002/rcm.317
M3 - Journal article
C2 - 11400205
VL - 15
SP - 969
EP - 974
JO - Rapid Communications in Mass Spectrometry
JF - Rapid Communications in Mass Spectrometry
SN - 0951-4198
IS - 12
ER -
ID: 16330738