Ivo Alexander Hendriks

Ivo Alexander Hendriks

Associate Professor


  1. 2024
  2. E-pub ahead of print

    A quantitative and site-specific atlas of the citrullinome reveals widespread existence of citrullination and insights into PADI4 substrates

    Stripp, Alexandra, Hendriks, Ivo Alexander, Elsborg, Jonas Damgaard, Buch-Larsen, Sara Charlotte, Nielsen, C. H., Terslev, L., Kirsch, Rebecca, Damgaard, D., Doncheva, Nadezhda Tsankova, Lennartsson, Caroline Linnea Elin, Rykær, M., Jensen, Lars Juhl, Christophorou, M. A. & Nielsen, Michael Lund, 2024, (E-pub ahead of print) In: Nature Structural and Molecular Biology.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    VCF1 is a p97/VCP cofactor promoting recognition of ubiquitylated p97-UFD1-NPL4 substrates

    Mirsanaye, Ann Schirin, Hoffmann, Saskia, Weisser, Melanie, Mund, Andreas, Lopez Mendez, B., Typas, D., van den Boom, J., Benedict, Bente, Hendriks, Ivo Alexander, Nielsen, Michael Lund, Meyer, H., Duxin, Julien, Montoya, Guillermo & Mailand, Niels, 2024, In: Nature Communications. 15, 1, 16 p., 2459.

    Research output: Contribution to journalJournal articlepeer-review

  4. 2023
  5. Published

    Characterizing ADP-Ribosylation Sites Using Af1521 Enrichment Coupled to ETD-Based Mass Spectrometry

    Anagho, Holda Awah, Elsborg, Jonas Damgaard, Hendriks, Ivo Alexander, Buch-Larsen, Sara Charlotte & Nielsen, Michael Lund, 2023, Poly(ADP-Ribose) Polymerase: Methods and Protocols. Tulin, A. V. (ed.). Humana Press, p. 251-270 (Methods in Molecular Biology, Vol. 2609).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  6. Published

    Characterizing citrullination by mass spectrometry-based proteomics

    Stripp, Alexandra, Hendriks, Ivo Alexander & Nielsen, Michael Lund, 2023, In: Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 378, 1890, 14 p., 20220237.

    Research output: Contribution to journalReviewpeer-review

  7. Published

    DAXX adds a de novo H3.3K9me3 deposition pathway to the histone chaperone network

    Carraro, Massimo, Hendriks, Ivo Alexander, Hammond, Colin, Solis-Mezarino, V., Völker-Albert, M., Elsborg, Jonas Damgaard, Weisser, Melanie, Spanos, C., Montoya, Guillermo, Rappsilber, J., Imhof, A., Nielsen, Michael Lund & Groth, Anja, 2023, In: Molecular Cell. 83, 7, p. 1075-1092.e9 28 p.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published
  9. Published

    The SUMO–NIP45 pathway processes toxic DNA catenanes to prevent mitotic failure

    Hertz, Emil Peter Thrane, Alonso de Vega, Ignacio, Kruse, Thomas, Wang, Y., Hendriks, Ivo Alexander, Bizard, A. H., Eugui-Anta, A., Hay, R. T., Nielsen, Michael Lund, Nilsson, Jakob, Hickson, Ian David & Mailand, Niels, 2023, In: Nature Structural and Molecular Biology. 30, p. 1303-1313

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Transient suppression of SUMOylation in embryonic stem cells generates embryo-like structures

    Cossec, J. C., Traboulsi, T., Sart, S., Loe-Mie, Y., Guthmann, M., Hendriks, Ivo Alexander, Theurillat, I., Nielsen, Michael Lund, Torres-Padilla, M. E., Baroud, C. N. & Dejean, A., 2023, In: Cell Reports. 42, 4, 27 p., 112380.

    Research output: Contribution to journalJournal articlepeer-review

  11. 2022
  12. Published

    SCAI promotes error-free repair of DNA interstrand crosslinks via the Fanconi anemia pathway

    Schubert, Lisa, Hendriks, Ivo Alexander, Hertz, Emil Peter Thrane, Wu, Wei, Sellés Baiget, Selene, Hoffmann, Saskia, Viswalingam, K. S., Gallina, I., Pentakota, S., Benedict, Bente, Johansen, Joachim, Apelt, K., Luijsterburg, M. S., Rasmussen, Simon, Lisby, Michael, Liu, Ying, Nielsen, Michael Lund, Mailand, Niels & Duxin, Julien, 2022, In: EMBO Reports. 23, 4, 20 p., e53639.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Waves of sumoylation support transcription dynamics during adipocyte differentiation

    Zhao, X., Hendriks, Ivo Alexander, Le Gras, S., Ye, T., Ramos-Alonso, L., Nguea P, A., Lien, G. F., Ghasemi, F., Klungland, A., Jost, B., Enserink, J. M., Nielsen, Michael Lund & Chymkowitch, P., 2022, In: Nucleic Acids Research. 50, 3, p. 1351-1369 19 p.

    Research output: Contribution to journalJournal articlepeer-review

  14. 2021
  15. Published

    DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network

    Hammond, Colin, Bao, H., Hendriks, Ivo Alexander, Carraro, Massimo, García-Nieto, A., Liu, Y., Reveron-Gomez, Nazaret, Spanos, C., Chen, L., Rappsilber, J., Nielsen, Michael Lund, Patel, D. J., Huang, H. & Groth, Anja, 2021, In: Molecular Cell. 81, 12, p. 2533-2548

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    Identification of Protein Direct Interactome with Genetic Code Expansion and Search Engine OpenUaa

    Liu, C., Wu, T., Shu, X., Li, S., Wang, D. R., Wang, N., Zhou, R., Yang, H., Jiang, H., Hendriks, Ivo Alexander, Gong, P., Zhang, L., Nielsen, Michael Lund, Li, K., Wang, L. & Yang, B., 2021, In: Advanced Biology. 5, 3, 11 p., 2000308.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    MaxQuant. Live Enables Enhanced Selectivity and Identification of Peptides Modified by Endogenous SUMO and Ubiquitin

    Hendriks, Ivo Alexander, Akimov, V., Blagoev, B. & Nielsen, Michael Lund, 2021, In: Journal of Proteome Research. 20, 4, p. 2042-2055 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    Mechanism and function of DNA replication-independent DNA-protein crosslink repair via the SUMO-RNF4 pathway

    Liu, Julio, Kühbacher, U., Larsen, N. B., Borgermann, N., Garvanska, Dimitriya Hristoforova, Hendriks, Ivo Alexander, Ackermann, Leena, Haahr, Peter Thorlund, Gallina, I., Guérillon, C., Branigan, E., Hay, R. T., Azuma, Y., Nielsen, Michael Lund, Duxin, Julien & Mailand, Niels, 2021, In: E M B O Journal. 40, 21 p., e107413.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    Temporal and site-specific adp-ribosylation dynamics upon different genotoxic stresses

    Buch-Larsen, Sara Charlotte, Stripp, Alexandra, Hendriks, Ivo Alexander & Nielsen, Michael Lund, 2021, In: Cells. 10, 11, 16 p., 2927.

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    The regulatory landscape of the human HPF1-and ARH3-dependent ADP-ribosylome

    Hendriks, Ivo Alexander, Buch-Larsen, Sara Charlotte, Prokhorova, E., Elsborg, Jonas Damgaard, Stripp, Alexandra, Zhu, K., Ahel, D., Lukas, Claudia, Ahel, I. & Nielsen, Michael Lund, 2021, In: Nature Communications. 12, 1, 16 p., 5893.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    The ubiquitin ligase RFWD3 is required for translesion DNA synthesis

    Gallina, I., Hendriks, Ivo Alexander, Hoffmann, Saskia, Larsen, N. B., Johansen, Joachim, S.Colding-Christensen, Camilla, Schubert, Lisa, Sellés Baiget, Selene, Fábián, Z., Kühbacher, U., Gao, A. O., Räschle, M., Rasmussen, Simon, Nielsen, Michael Lund, Mailand, Niels & Duxin, Julien, 2021, In: Molecular Cell. 81, 3, p. 442-458.e9 27 p.

    Research output: Contribution to journalJournal articlepeer-review

  22. 2020
  23. Published

    Extensive SUMO Modification of Repressive Chromatin Factors Distinguishes Pluripotent from Somatic Cells

    Theurillat, I., Hendriks, Ivo Alexander, Cossec, J., Andrieux, A., Nielsen, Michael Lund & Dejean, A., 2020, In: Cell Reports. 32, 11, 20 p., 108146.

    Research output: Contribution to journalJournal articlepeer-review

  24. Published

    Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation

    Buch-Larsen, Sara Charlotte, Hendriks, Ivo Alexander, Lodge, J. M., Rykaer, M., Furtwängler, Benjamin, Shishkova, E., Westphall, M. S., Coon, J. J. & Nielsen, Michael Lund, 2020, In: Cell Reports. 32, 12, 17 p., 108176.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    Multisite SUMOylation restrains DNA polymerase η interactions with DNA damage sites

    Guerillon, Claire Aline, Smedegaard, S., Hendriks, Ivo Alexander, Nielsen, Michael Lund & Mailand, Niels, 2020, In: Journal of Biological Chemistry. 295, p. 8350-8362

    Research output: Contribution to journalJournal articlepeer-review

  26. 2019
  27. Published

    An advanced strategy for comprehensive profiling of ADP-ribosylation sites using mass spectrometry-based proteomics

    Hendriks, Ivo Alexander, Buch-Larsen, Sara Charlotte & Nielsen, Michael Lund, 2019, In: Molecular and Cellular Proteomics. 18, 5, p. 1010-1026

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    SUMOylation promotes protective responses to DNA-protein crosslinks

    Borgermann, N., Ackermann, Leena, Schwertman, P., Hendriks, Ivo Alexander, Thijssen, K., Liu, Julio, Lans, H., Nielsen, Michael Lund & Mailand, Niels, 2019, In: E M B O Journal. 38, 17 p., e101496.

    Research output: Contribution to journalJournal articlepeer-review

  29. 2018
  30. Published

    Site-specific characterization of endogenous SUMOylation across species and organs

    Hendriks, Ivo Alexander, Lyon, D., Su, D., Skotte, Niels Henning, Daniel, J. A., Jensen, Lars Juhl & Nielsen, Michael Lund, 2018, In: Nature Communications. 9, p. 1-17 2456.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published
  32. 2017
  33. Published

    Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation

    Hendriks, Ivo Alexander, Lyon, D., Young, C., Jensen, Lars Juhl, Vertegaal, A. C. O. & Nielsen, Michael Lund, Mar 2017, In: Nature Structural and Molecular Biology. 24, 3, p. 325-336 12 p.

    Research output: Contribution to journalJournal articlepeer-review

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