Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes

Research output: Contribution to journalJournal articlepeer-review

Standard

Cyclebase 3.0 : a multi-organism database on cell-cycle regulation and phenotypes. / Santos Delgado, Alberto; Wernersson, Rasmus; Jensen, Lars Juhl.

In: Nucleic Acids Research, Vol. 43, No. D1, 01.2015, p. D1140-4.

Research output: Contribution to journalJournal articlepeer-review

Harvard

Santos Delgado, A, Wernersson, R & Jensen, LJ 2015, 'Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes', Nucleic Acids Research, vol. 43, no. D1, pp. D1140-4. https://doi.org/10.1093/nar/gku1092

APA

Santos Delgado, A., Wernersson, R., & Jensen, L. J. (2015). Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes. Nucleic Acids Research, 43(D1), D1140-4. https://doi.org/10.1093/nar/gku1092

Vancouver

Santos Delgado A, Wernersson R, Jensen LJ. Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes. Nucleic Acids Research. 2015 Jan;43(D1):D1140-4. https://doi.org/10.1093/nar/gku1092

Author

Santos Delgado, Alberto ; Wernersson, Rasmus ; Jensen, Lars Juhl. / Cyclebase 3.0 : a multi-organism database on cell-cycle regulation and phenotypes. In: Nucleic Acids Research. 2015 ; Vol. 43, No. D1. pp. D1140-4.

Bibtex

@article{7d59b863df7a480aadbccb872f17b392,
title = "Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes",
abstract = "The eukaryotic cell division cycle is a highly regulated process that consists of a complex series of events and involves thousands of proteins. Researchers have studied the regulation of the cell cycle in several organisms, employing a wide range of high-throughput technologies, such as microarray-based mRNA expression profiling and quantitative proteomics. Due to its complexity, the cell cycle can also fail or otherwise change in many different ways if important genes are knocked out, which has been studied in several microscopy-based knockdown screens. The data from these many large-scale efforts are not easily accessed, analyzed and combined due to their inherent heterogeneity. To address this, we have created Cyclebase-available at http://www.cyclebase.org-an online database that allows users to easily visualize and download results from genome-wide cell-cycle-related experiments. In Cyclebase version 3.0, we have updated the content of the database to reflect changes to genome annotation, added new mRNA and protein expression data, and integrated cell-cycle phenotype information from high-content screens and model-organism databases. The new version of Cyclebase also features a new web interface, designed around an overview figure that summarizes all the cell-cycle-related data for a gene.",
author = "{Santos Delgado}, Alberto and Rasmus Wernersson and Jensen, {Lars Juhl}",
note = "{\textcopyright} The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.",
year = "2015",
month = jan,
doi = "10.1093/nar/gku1092",
language = "English",
volume = "43",
pages = "D1140--4",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "D1",

}

RIS

TY - JOUR

T1 - Cyclebase 3.0

T2 - a multi-organism database on cell-cycle regulation and phenotypes

AU - Santos Delgado, Alberto

AU - Wernersson, Rasmus

AU - Jensen, Lars Juhl

N1 - © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

PY - 2015/1

Y1 - 2015/1

N2 - The eukaryotic cell division cycle is a highly regulated process that consists of a complex series of events and involves thousands of proteins. Researchers have studied the regulation of the cell cycle in several organisms, employing a wide range of high-throughput technologies, such as microarray-based mRNA expression profiling and quantitative proteomics. Due to its complexity, the cell cycle can also fail or otherwise change in many different ways if important genes are knocked out, which has been studied in several microscopy-based knockdown screens. The data from these many large-scale efforts are not easily accessed, analyzed and combined due to their inherent heterogeneity. To address this, we have created Cyclebase-available at http://www.cyclebase.org-an online database that allows users to easily visualize and download results from genome-wide cell-cycle-related experiments. In Cyclebase version 3.0, we have updated the content of the database to reflect changes to genome annotation, added new mRNA and protein expression data, and integrated cell-cycle phenotype information from high-content screens and model-organism databases. The new version of Cyclebase also features a new web interface, designed around an overview figure that summarizes all the cell-cycle-related data for a gene.

AB - The eukaryotic cell division cycle is a highly regulated process that consists of a complex series of events and involves thousands of proteins. Researchers have studied the regulation of the cell cycle in several organisms, employing a wide range of high-throughput technologies, such as microarray-based mRNA expression profiling and quantitative proteomics. Due to its complexity, the cell cycle can also fail or otherwise change in many different ways if important genes are knocked out, which has been studied in several microscopy-based knockdown screens. The data from these many large-scale efforts are not easily accessed, analyzed and combined due to their inherent heterogeneity. To address this, we have created Cyclebase-available at http://www.cyclebase.org-an online database that allows users to easily visualize and download results from genome-wide cell-cycle-related experiments. In Cyclebase version 3.0, we have updated the content of the database to reflect changes to genome annotation, added new mRNA and protein expression data, and integrated cell-cycle phenotype information from high-content screens and model-organism databases. The new version of Cyclebase also features a new web interface, designed around an overview figure that summarizes all the cell-cycle-related data for a gene.

U2 - 10.1093/nar/gku1092

DO - 10.1093/nar/gku1092

M3 - Journal article

C2 - 25378319

VL - 43

SP - D1140-4

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - D1

ER -

ID: 127247308