Simon Rasmussen

Simon Rasmussen

Associate professor, group leader, Associate Professor

Member of:

    ORCID: 0000-0001-6323-9041

    Publication year:
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    91 - 100 out of 103Page size: 10
    1. 2013
    2. Published

      Richness of human gut microbiome correlates with metabolic markers

      Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, Mani, Batto, J., Kennedy, S., Leonard, P., Li, J., Burgdorf, Kristoffer Sølvsten, Grarup, Niels, Jørgensen, T., Brandslund, I., Nielsen, H. B., Juncker, A., dos Santos, M. B. Q., Levenez, F., Pons, N., Rasmussen, Simon, Sunagawa, S., Tap, J., Tims, S., Zoetendal, E. G., Brunak, S., Clément, K., Doré, J., Kleerebezem, M., Kristiansen, Karsten, Renault, P., Sicheritz-Ponten, T., de Vos, W. M., Zucker, J., Raes, J., Hansen, Torben, Bork, P., Wang, J., Ehrlich, S. D., Pedersen, Oluf Borbye, Guedon, E., Delorme, C., Layec, S., Khaci, G., van de Guchte, M., Vandemeulebrouck, G., Jamet, A., Dervyn, R., Sanchez, N., Maguin, E., Haimet, F., Winogradski, Y., Cultrone, A., Leclerc, M., Juste, C., Blottière, H., Pelletier, E., LePaslier, D., Artiguenave, F., Bruls, T., Weissenbach, J., Turner, K., Parkhill, J., Antolin, M., Manichanh, C., Casellas, F., Boruel, N., Varela, E., Torrejon, A., Guarner, F., Denariaz, G., Derrien, M., van Hylckama Vlieg, J. E. T., Veiga, P., Oozeer, R., Knol, J., Rescigno, M., Brechot, C., Mérieux, A., M'Rini, C. & Yamada, T., 2013, In: Nature. 500, 7464, p. 541-546 6 p.

      Research output: Contribution to journal › Journal article › peer-review

    3. Targeted metabolic engineering guided by computational analysis of single-nucleotide polymorphisms (SNPs)

      Udatha, D. B. R. K. G., Rasmussen, Simon, Sicheritz-Pontén, T. & Panagiotou, G., 2013, In: Methods in molecular biology (Clifton, N.J.). 985, p. 409-28 20 p.

      Research output: Contribution to journal › Journal article › peer-review

    4. 2012
    5. Published

      Multilocus sequence typing of total-genome-sequenced bacteria

      Larsen, Mette Vang, Cosentino, S., Rasmussen, Simon, Friis, Carsten, Hasman, H., Marvig, R. L., Jelsbak, L., Sicheritz-Pontén, T., Ussery, D. W., Aarestrup, F. M. & Lund, O., Apr 2012, In: Journal of Clinical Microbiology. 50, 4, p. 1355-61 7 p.

      Research output: Contribution to journal › Journal article › peer-review

    6. Published

      Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism

      Buescher, J. M., Liebermeister, W., Jules, M., Uhr, M., Muntel, J., Botella, E., Hessling, B., Kleijn, R. J., Le Chat, L., Lecointe, F., Mäder, U., Nicolas, P., Piersma, S., Rügheimer, F., Becher, D., Bessieres, P., Bidnenko, E., Denham, E. L., Dervyn, E., Devine, K. M., Doherty, G., Drulhe, S., Felicori, L., Fogg, M. J., Goelzer, A., Hansen, A., Harwood, C. R., Hecker, M., Hubner, S., Hultschig, C., Jarmer, H., Klipp, E., Leduc, A., Lewis, P., Molina, F., Noirot, P., Peres, S., Pigeonneau, N., Pohl, S., Rasmussen, Simon, Rinn, B., Schaffer, M., Schnidder, J., Schwikowski, B., Van Dijl, J. M., Veiga, P., Walsh, S., Wilkinson, A. J., Stelling, J. & Aymerich, S., 2 Mar 2012, In: Science (New York, N.Y.). 335, 6072, p. 1099-103 5 p.

      Research output: Contribution to journal › Journal article › peer-review

    7. Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene

      Bowman, J. S., Rasmussen, Simon, Blom, N., Deming, J. W., Rysgaard, S. & Sicheritz-Ponten, T., Jan 2012, In: I S M E Journal. 6, 1, p. 11-20 10 p.

      Research output: Contribution to journal › Journal article › peer-review

    8. Identification of acquired antimicrobial resistance genes

      Zankari, E., Hasman, H., Cosentino, S., Vestergaard, M., Rasmussen, Simon, Lund, O., Aarestrup, F. M. & Larsen, M. V., 2012, In: Journal of Antimicrobial Chemotherapy. 67, 11, p. 2640-4 5 p.

      Research output: Contribution to journal › Journal article › peer-review

    9. Published

      snpTree--a web-server to identify and construct SNP trees from whole genome sequence data

      Leekitcharoenphon, P., Kaas, R. S., Thomsen, M. C. F., Friis, Carsten, Rasmussen, Simon & Aarestrup, F. M., 2012, In: BMC Genomics. 13 Suppl 7, p. S6

      Research output: Contribution to journal › Journal article › peer-review

    10. 2011
    11. Published

      An Aboriginal Australian genome reveals separate human dispersals into Asia

      Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, Simon, Albrechtsen, Anders, Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., Kivisild, T., Zhai, W., Eriksson, A., Manica, A., Orlando, L., De La Vega, F. M., Tridico, S., Metspalu, E., Nielsen, K., Avila Arcos, M. D. C., Moreno Mayar, J. Víctor, Muller, C., Dortch, J., Gilbert, M Thomas P, Lund, O., Wesolowska, A., Karmin, M., Weinert, L. A., Wang, B., Li, J., Tai, S., Xiao, F., Hanihara, T., van Driem, G., Jha, A. R., Ricaut, F., de Knijff, P., Migliano, A. B., Gallego Romero, I., Kristiansen, Karsten, Lambert, D. M., Brunak, Søren, Forster, P., Brinkmann, B., Nehlich, O., Bunce, M., Richards, M., Gupta, R., Bustamante, C. D., Krogh, Anders, Foley, R. A., Lahr, M. M., Balloux, F., Sicheritz-Pontén, T., Villems, R., Nielsen, Rasmus, Wang, J. & Willerslev, Eske, 2011, In: Science. 334, 6052, p. 94-98 5 p.

      Research output: Contribution to journal › Journal article › peer-review

    12. 2010
    13. Published

      Bifidobacterium bifidum actively changes the gene expression profile induced by Lactobacillus acidophilus in murine dendritic cells

      Weiss, G. M., Rasmussen, Simon, Fink, L. N., Jarmer, H. Ø., Nielsen, B. M. N. & Frøkiær, Hanne, 2010, In: PLoS ONE. 5, 6, 10 p.

      Research output: Contribution to journal › Journal article › peer-review

    14. Published

      Lactobacillus acidophilus induces virus immune defence genes in murine dendritic cells by a Toll-like receptor-2-dependent mechanism

      Weiss, G. M., Rasmussen, Simon, Zeuthen, L., Nielsen, B. M. N., Jarmer, H. Ø., Jespersen, Lene & Frøkiær, Hanne, 2010, In: Immunology. 131, 2, p. 268-281 14 p.

      Research output: Contribution to journal › Journal article › peer-review

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    ID: 204201681