Piotr Jaroslaw Chmura

Piotr Jaroslaw Chmura

Research programmer


Publication year:
  1. 2021
  2. Published

    biotoolsSchema: a formalized schema for bioinformatics software description

    Ison, J., Ienasescu, H., Rydza, E., Chmura, Piotr Jaroslaw, Rapacki, K., Gaignard, A., Schwämmle, V., Van Helden, J., Kalaš, M. & Ménager, H., 2021, In: GigaScience. 10, 1, 19 p., giaa157.

    Research output: Contribution to journalJournal articlepeer-review

  3. 2020
  4. Published

    Community curation of bioinformatics software and data resources

    Ison, J., Ménager, H., Brancotte, B., Jaaniso, E., Salumets, A., Raček, T., Lamprecht, A. L., Palmblad, M., Kalaš, M., Chmura, Piotr Jaroslaw, Hancock, J. M., Schwämmle, V. & Ienasescu, H. I., 2020, In: Briefings in Bioinformatics. 21, 5, p. 1697-1705 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Dynamic and explainable machine learning prediction of mortality in patients in the intensive care unit: a retrospective study of high-frequency data in electronic patient records

    Thorsen-Meyer, H., Nielsen, Annelaura Bach, Nielsen, A. P., Kaas-Hansen, Benjamin Skov, Toft, P., Schierbeck, J., Strøm, T., Chmura, Piotr Jaroslaw, Heimann, M., Dybdahl, L., Spangsege, L., Hulsen, P., Belling, K., Brunak, Søren & Perner, Anders, 2020, In: The Lancet Digital Health. 2, 4, p. e179–91 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    High-throughput sequencing of circulating plasma microRNAs in newly diagnosed type 1 diabetes identifies four different patient clusters

    Sebastiani, G., Grieco, G. E., Fignani, D., Chmura, Piotr Jaroslaw, Brorsson, C. A., Bruggraber, S., Pugliese, A., Evans-Molina, C., Knip, M., Peakman, M., Schulte, A. M., Brunak, Søren, Dunger, D. B., Mathieu, C. & Dotta, F., 2020, In: Diabetologia. 63, Suppl. 1, p. S160 1 p.

    Research output: Contribution to journalConference abstract in journal

  7. Published

    JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools

    Friedrichs, M., Shoshi, A., Chmura, Piotr Jaroslaw, Ison, J., Schwammle, V., Schreiber, F., Hofestadt, R. & Sommer, B., 2020, In: Journal of integrative bioinformatics. 16, 8 p., 20190059.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    Supercomputing and Secure Cloud Infrastructures in Biology and Medicine

    Jespersgaard, C., Syed, A., Chmura, Piotr Jaroslaw & Longreen, P., 2020, In: Annual Review of Biomedical Data Science. 3, p. 391-410 20 p.

    Research output: Contribution to journalReviewpeer-review

  9. 2019
  10. Published

    Survival prediction in intensive-care units based on aggregation of long-term disease history and acute physiology: a retrospective study of the Danish National Patient Registry and electronic patient records

    Nielsen, Annelaura Bach, Thorsen-Meyer, H. C., Belling, K., Nielsen, A. P., Thomas, Cecilia Engel, Chmura, Piotr Jaroslaw, Lademann, M., Moseley, P. L., Heimann, M., Dybdahl, L., Spangsege, L., Hulsen, P., Perner, Anders & Brunak, Søren, 2019, In: The Lancet Digital Health. 1, 2, p. e78-e89 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    The bio.tools registry of software tools and data resources for the life sciences

    Ison, J., Ienasescu, H., Chmura, P., Rydza, E., Ménager, H., Kalaš, M., Schwämmle, V., Grüning, B., Beard, N., Lopez, R., Duvaud, S., Stockinger, H., Persson, B., Vařeková, R. S., Raček, T., Vondrášek, J., Peterson, H., Salumets, A., Jonassen, I., Hooft, R. & 16 others, Nyrönen, T., Valencia, A., Capella, S., Gelpí, J., Zambelli, F., Savakis, B., Leskošek, B., Rapacki, K., Blanchet, C., Jimenez, R., Oliveira, A., Vriend, G., Collin, O., van Helden, J., Løngreen, P. & Brunak, Søren, 2019, In: Genome Biology. 20, 1, 4 p., 164.

    Research output: Contribution to journalLetterpeer-review

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