Katerina Nastou

Katerina Nastou

Postdoc


Publication year:
  1. 2021
  2. Exploring the conservation of Alzheimer-related pathways between H. sapiens and C. elegans: a network alignment approach

    Apostolakou, A. E., Sula, X. K., Nastou, Katerina, Nasi, G. I. & Iconomidou, V. A., 2021, In: Scientific Reports. 11, 1, 11 p., 4572.

    Research output: Contribution to journalJournal articlepeer-review

  3. Linear B-cell epitope prediction for in silico vaccine design: A performance review of methods available via command-line interface

    Galanis, K. A., Nastou, Katerina, Papandreou, N. C., Petichakis, G. N., Pigis, D. G. & Iconomidou, V. A., 2021, In: International Journal of Molecular Sciences. 22, 6, 19 p., 3210.

    Research output: Contribution to journalReviewpeer-review

  4. Published

    The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets

    Szklarczyk, D., Gable, A. L., Nastou, Katerina, Lyon, D., Kirsch, Rebecca, Pyysalo, S., Doncheva, Nadezhda Tsankova, Legeay, M., Fang, T., Bork, P., Jensen, Lars Juhl & von Mering, C., 2021, In: Nucleic Acids Symposium Series. 49, D1, p. D605-D612 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. 2022
  6. Published

    Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks

    Doncheva, Nadezhda Tsankova, Morris, J. H., Holze, H., Kirsch, Rebecca, Nastou, Katerina, Cuesta-Astroz, Y., Rattei, T., Szklarczyk, D., Von Mering, C. & Jensen, Lars Juhl, 2022, In: Journal of Proteome Research. 22, 2, p. 637-646

    Research output: Contribution to journalJournal articlepeer-review

  7. LiGIoNs: A computational method for the detection and classification of ligand-gated ion channels

    Apostolakou, A. E., Nastou, Katerina, Petichakis, G. N., Litou, Z. I. & Iconomidou, V. A., 2022, In: Biochimica et Biophysica Acta - Biomembranes. 1864, 9, 183956.

    Research output: Contribution to journalJournal articlepeer-review

  8. 2023
  9. Published

    S1000: a better taxonomic name corpus for biomedical information extraction

    Luoma, J., Nastou, Katerina, Ohta, T., Toivonen, H., Pafilis, E., Jensen, Lars Juhl & Pyysalo, S., 2023, In: Bioinformatics. 39, 6, 8 p., btad369.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest

    Szklarczyk, D., Kirsch, Rebecca, Koutrouli, Mikaela, Nastou, Katerina, Mehryary, F., Hachilif, R., Gable, A. L., Fang, T., Doncheva, Nadezhda Tsankova, Pyysalo, S., Bork, P., Jensen, Lars Juhl & von Mering, C., 2023, In: Nucleic Acids Research. 51, D1, p. D638-D646 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. 2024
  12. Published

    FAVA: High-quality functional association networks inferred from scRNA-seq and proteomics data

    Koutrouli, Mikaela, Nastou, Katerina, Piera Líndez, Pau, Bouwmeester, R., Rasmussen, Simon, Martens, L. & Jensen, Lars Juhl, 2024, In: Bioinformatics. 40, 2, 11 p., btae010.

    Research output: Contribution to journalJournal articlepeer-review

ID: 232691346