Jakob Nybo Nissen

Jakob Nybo Nissen

Assistant Professor, Affiliate Professor

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    1 - 5 out of 5Page size: 10
    1. 2023
    2. Published

      Adversarial and variational autoencoders improve metagenomic binning

      Piera Líndez, Pau, Johansen, Joachim, Kutuzova, Svetlana, Sigurdsson, Arnór Ingi, Nissen, Jakob Nybo & Rasmussen, S., 2023, In: Communications Biology . 6, 10 p., 1073.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models: [with Author Correction]

      Allesøe, R. L., Lundgaard, A. T., Hernández Medina, R., Aguayo-Orozco, A., Johansen, J., Nissen, J. N., Brorsson, C., Mazzoni, G., Niu, L., Biel, J. H., Brasas, V., Webel, H., Benros, M. E., Pedersen, A. G., Chmura, P. J., Jacobsen, U. P., Mari, A., Koivula, R., Mahajan, A., Vinuela, A. & 31 others, Tajes, J. F., Sharma, S., Haid, M., Hong, M., Musholt, P. B., De Masi, F., Vogt, J., Pedersen, H. K., Gudmundsdottir, V., Jones, A., Kennedy, G., Bell, J., Thomas, E. L., Frost, G., Thomsen, Henrik S., Hansen, E., Hansen, T. H., drb459, drb459, Muilwijk, M., Blom, M. T., 't Hart, L. M., Pattou, F., Raverdy, V., Brage, S., Ridderstråle, M., Pedersen, Oluf Borbye, Hansen, Torben, Banasik, Karina, Rasmussen, Simon, Brunak, Søren & IMI-DIRECT consortium, I. C., 2023, In: Nature Biotechnology. 41, 3, p. 399–408 18 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Experimental infection of pigs and ferrets with "pre-pandemic," human-adapted, and swineadapted variants of the H1N1pdm09 influenza A virus reveals significant differences in viral dynamics and pathological manifestations

      Kristensen, Charlotte, Laybourn, H. A., Crumpton, J. C., Martiny, Karen, Webb, A., Ryt-Hansen, Pia, Trebbien, R., Jensen, Henrik Elvang, Nissen, Jakob Nybo, Skovgaard, K., Webby, R. J. & Larsen, Lars, 2023, In: PLoS Pathogens. 19, 12, 23 p., e1011838.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. 2022
    6. Published

      Critical Assessment of Metagenome Interpretation: the second round of challenges

      Meyer, F., Fritz, A., Deng, Z. L., Koslicki, D., Lesker, T. R., Gurevich, A., Robertson, G., Alser, M., Antipov, D., Beghini, F., Bertrand, D., Brito, J. J., Brown, C. T., Buchmann, J., Buluç, A., Chen, B., Chikhi, R., Clausen, P. T. L. C., Cristian, A., Dabrowski, P. W. & 83 others, Darling, A. E., Egan, R., Eskin, E., Georganas, E., Goltsman, E., Gray, M. A., Hansen, Lars Hestbjerg, Hofmeyr, S., Huang, P., Irber, L., Jia, H., Jørgensen, T. S., Kieser, S. D., Klemetsen, T., Kola, A., Kolmogorov, M., Korobeynikov, A., Kwan, J., LaPierre, N., Lemaitre, C., Li, C., Limasset, A., Malcher-Miranda, F., Mangul, S., Marcelino, V. R., Marchet, C., Marijon, P., Meleshko, D., Mende, D. R., Milanese, A., Nagarajan, N., Nissen, Jakob Nybo, Nurk, S., Oliker, L., Paoli, L., Peterlongo, P., Piro, V. C., Porter, J. S., Rasmussen, Simon, Rees, E. R., Reinert, K., Renard, B., Robertsen, E. M., Rosen, G. L., Ruscheweyh, H. J., Sarwal, V., Segata, N., Seiler, E., Shi, L., Sun, F., Sunagawa, S., Sørensen, Søren Johannes, Thomas, A., Tong, C., Trajkovski, M., Tremblay, J., Uritskiy, G., Vicedomini, R., Wang, Z., Wang, Z., Wang, Z., Warren, A., Willassen, N. P., Yelick, K., You, R., Zeller, G., Zhao, Z., Zhu, S., Zhu, J., Garrido-Oter, R., Gastmeier, P., Hacquard, S., Häußler, S., Khaledi, A., Maechler, F., Mesny, F., Radutoiu, S., Schulze-Lefert, P., Smit, N., Strowig, T., Bremges, A., Sczyrba, A. & McHardy, A. C., 2022, In: Nature Methods. 19, 4, p. 429-440

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Severe Human Case of Zoonotic Infection with Swine-Origin Influenza A Virus, Denmark, 2021

      Andersen, K. M., Vestergaard, L. S., Nissen, Jakob Nybo, George, Sophie Joanna, Ryt-Hansen, Pia, Hjulsager, C. K., Krog, J. S., Skov, M. N., Alexandersen, S., Larsen, Lars & Trebbien, R., 2022, In: Emerging Infectious Diseases . 28, 12, p. 2561-2564 4 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    ID: 301778210