The NNF Center for Protein Research

  1. Published

    The 3rd DBCLS BioHackathon: improving life science data integration with semantic Web technologies

    Katayama, T., Wilkinson, M. D., Micklem, G., Kawashima, S., Yamaguchi, A., Nakao, M., Yamamoto, Y., Okamoto, S., Oouchida, K., Chun, H., Aerts, J., Afzal, H., Antezana, E., Arakawa, K., Aranda, B., Belleau, F., Bolleman, J., Bonnal, R. J., Chapman, B., Cock, P., Eriksson, T., Gordon, P., Goto, N., Hayashi, K., Horn, H., Ishiwata, R., Kaminuma, E., Kasprzyk, A., Kawaji, H., Kido, N., Kim, Y. J., Kinjo, A. R., Konishi, F., Kwon, K., Labarga, A., Lamprecht, A., Lin, Y., Lindenbaum, P., McCarthy, L., Morita, H., Murakami, K., Nagao, K., Nishida, K., Nishimura, K., Nishizawa, T., Ogishima, S., Ono, K., Oshita, K., Park, K., Prins, P., Saito, T. L., Samwald, M., Satagopam, V. P., Shigemoto, Y., Smith, R., Splendiani, A., Sugawara, H., Taylor, J., Vos, R., Withers, D., Yamasaki, C., Zmasek, C. M., Kawamoto, S., Okubo, K., Asai, K. & Takagi, T., 11 Feb 2013, In : Journal of Biomedical Semantics. 4, 1, p. 6 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    The bio.tools registry of software tools and data resources for the life sciences

    Ison, J., Ienasescu, H., Chmura, Piotr Jaroslaw, Rydza, E., Ménager, H., Kalaš, M., Schwämmle, V., Grüning, B., Beard, N., Lopez, R., Duvaud, S., Stockinger, H., Persson, B., Vařeková, R. S., Raček, T., Vondrášek, J., Peterson, H., Salumets, A., Jonassen, I., Hooft, R., Nyrönen, T., Valencia, A., Capella, S., Gelpí, J., Zambelli, F., Savakis, B., Leskošek, B., Rapacki, K., Blanchet, C., Jimenez, R., Oliveira, A., Vriend, G., Collin, O., van Helden, J., Løngreen, P. & Brunak, Søren, 2019, In : Genome Biology. 20, 1, 4 p., 164.

    Research output: Contribution to journalLetterResearchpeer-review

  3. Published

    The AAA-ATPase VCP/p97 promotes 53BP1 recruitment by removing L3MBTL1 from DNA double-strand breaks

    Acs, K., Luijsterburg, M. S., Ackermann, Leena, Salomons, F. A., Hoppe, T. & Dantuma, N. P., 27 Nov 2011, In : Nature Structural & Molecular Biology. 18, 12, p. 1345-50 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The AID-induced DNA damage response in chromatin

    Daniel, J. A. & Nussenzweig, A., 9 May 2013, In : Molecular Cell. 50, 3, p. 309-21 13 p.

    Research output: Contribution to journalReviewResearchpeer-review

  5. Published

    The CMG Helicase Bypasses DNA-Protein Cross-Links to Facilitate Their Repair

    Sparks, J. L., Chistol, G., Gao, A. O., Räschle, M., Larsen, Nicolai Balle, Mann, Matthias, Duxin, Julien & Walter, J. C., 2019, In : Cell. 176, 1-2, p. 167-181.e21 36 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    The Case for Proteomics and Phospho-Proteomics in Personalized Cancer Medicine

    Doll, S., Gnad, F. & Mann, Matthias, 2019, In : Proteomics - Clinical Applications. 13, 2, 10 p., e1800113.

    Research output: Contribution to journalReviewResearchpeer-review

  7. Published

    The Chromatin Scaffold Protein SAFB1 Renders Chromatin Permissive for DNA Damage Signaling

    Altmeyer, M., Toledo Lazaro, Luis Ignacio, Gudjónsson, Thorkell, Grøfte, M., Rask, M., Lukas, Claudia, Akimov, V., Blagoev, B., Bartek, J. & Lukas, Jiri, 24 Oct 2013, In : Molecular Cell. 52, 2, p. 206-220

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The Coming Age of Complete, Accurate, and Ubiquitous Proteomes

    Mann, Matthias, Kulak, N. A., Nagaraj, N. & Cox, J., 21 Feb 2013, In : Molecular Cell. 49, 4, p. 583-590 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    The DNA damage checkpoint precedes activation of ARF in response to escalating oncogenic stress during tumorigenesis

    Evangelou, K., Bartkova, J., Kotsinas, A., Pateras, I. S., Liontos, M., Velimezi, G., Kosar, M., Liloglou, T., Trougakos, I. P., Dyrskjot, L., Andersen, C. L., Papaioannou, M., Drosos, Y., Papafotiou, G., Hodny, Z., Sosa-Pineda, B., Wu, X., Klinakis, A., Ørntoft, T. F., Lukas, Jiri, Bartek, J. & Gorgoulis, V. G., 1 Nov 2013, In : Cell Death and Differentiation. 20, 11, p. 1485-1497 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    The DNA damage- and transcription-associated protein Paxip1 controls thymocyte development and emigration

    Callen, E., Faryabi, R. B., Daniel, J. A., Nussenzweig, A., Luckey, M., Park, J., Hao, B., Krangel, M. S., Yang, W., Peng, W., Sun, H., Dressler, G., Chi, H. & Ge, K., 2012, In : Immunity. 37, 6, p. 971-985 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review