The NNF Center for Protein Research

  1. 2018
  2. Published

    Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

    Théry, C., Witwer, K. W., Aikawa, E., Alcaraz, M. J., Anderson, J. D., Andriantsitohaina, R., Antoniou, A., Arab, T., Archer, F., Atkin-Smith, G. K., Ayre, D. C., Bach, J., Bachurski, D., Baharvand, H., Balaj, L., Baldacchino, S., Bauer, N. N., Baxter, A. A., Bebawy, M., Beckham, C., Bedina Zavec, A., Benmoussa, A., Berardi, A. C., Bergese, P., Bielska, E., Blenkiron, C., Bobis-Wozowicz, S., Boilard, E., Boireau, W., Bongiovanni, A., Borràs, F. E., Bosch, S., Boulanger, C. M., Breakefield, X., Breglio, A. M., Brennan, M. Á., Brigstock, D. R., Brisson, A., Broekman, M. L., Bromberg, J. F., Bryl-Górecka, P., Buch, S., Buck, A. H., Burger, D., Busatto, S., Buschmann, D., Jørgensen, M. M., Jacobsen, Søren, Nejsum, P., Østergaard, Ole & Xu, J., 2018, In : Journal of Extracellular Vesicles. 7, 1, p. 1-47 1535750.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Molecular basis of Tousled-Like Kinase 2 activation

    Mortuza, G. B., Hermida, D., Pedersen, A., Segura-Bayona, S., López-Méndez, B., Redondo, P., Rüther, Patrick, Pozdnyakova, I., Garrote, A. M., Muñoz, I. G., Villamor-Payà, M., Jauset, C., Olsen, Jesper Velgaard, Stracker, T. H. & Montoya, Guillermo, 2018, In : Nature Communications. 9, 1, p. 2535 2535.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Molecular genetic overlap between migraine and major depressive disorder

    Yang, Y., Zhao, H., Boomsma, D. I., Ligthart, L., Belin, A. C., Smith, G. D., Esko, T., Freilinger, T. M., Hansen, Thomas Folkmann, Ikram, M. A., Kallela, M., Kubisch, C., Paraskevi, C., Strachan, D. P., Wessman, M., Gormley, P., Anttila, V., Winsvold, B. S., Palta, P., Esko, T., Pers, Tune H, Farh, K. H., Cuenca-Leon, E., Muona, M., Furlotte, N. A., Kurth, T., Ingason, A., McMahon, G., Ligthart, L., Terwindt, G. M., Kallela, M., Freilinger, T. M., Ran, C., Gordon, S. G., Stam, A. H., Steinberg, S., Borck, G., Koiranen, M., Quaye, L., Adams, H. H. H., Lehtimäki, T., Sarin, A. P., Wedenoja, J., Hinds, D. A., Buring, J. E., Schürks, M., Christensen, A. F., Hansen, Thomas Folkmann, Werge, Thomas & Olesen, Jes, 2018, In : European Journal of Human Genetics. 26, 8, p. 1202-1216 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Multi-level Proteomics Identifies CT45 as a Chemosensitivity Mediator and Immunotherapy Target in Ovarian Cancer

    Coscia, Fabian, Lengyel, E., Duraiswamy, J., Ashcroft, B., Bassani-Sternberg, M., Wierer, M., Johnson, A., Wroblewski, K., Montag, A., Yamada, S. D., López-Méndez, B., Nilsson, Jakob, Mund, Andreas, Mann, Matthias & Curtis, M., 2018, In : Cell. 175, 1, p. 159-170.e16

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Mutational signatures reveal the role of RAD52 in p53-independent p21-driven genomic instability

    Galanos, P., Pappas, G., Polyzos, A., Kotsinas, A., Svolaki, I., Giakoumakis, N. N., Glytsou, C., Pateras, I. S., Swain, U., Souliotis, V. L., Georgakilas, A. G., Geacintov, N., Scorrano, L., Lukas, Claudia, Lukas, Jiri, Livneh, Z., Lygerou, Z., Chowdhury, D., Sørensen, Claus Storgaard, Bartek, J. & Gorgoulis, V. G., 2018, In : Genome Biology (Online Edition). 19, p. 1-18 37.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    NOTCH3 inactivation increases triple negative breast cancer sensitivity to gefitinib by promoting EGFR tyrosine dephosphorylation and its intracellular arrest

    Diluvio, G., Del Gaudio, F., Giuli, M. V., Franciosa, Giulia, Giuliani, E., Palermo, R., Besharat, Z. M., Pignataro, M. G., Vacca, A., d'Amati, G., Maroder, M., Talora, C., Capalbo, C., Bellavia, D. & Checquolo, S., 2018, In : Critical Reviews in Oncogenesis. 7, p. 1-15 42.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Online parallel accumulation - serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer

    Meier, F., Brunner, A., Koch, S., Koch, H., Lubeck, M., Krause, M., Goedecke, N., Decker, J., Kosinski, T., Park, M. A., Bache, N., Hoerning, O., Cox, J., Räther, O. & Mann, Matthias, 2018, In : Molecular and Cellular Proteomics. 17, 12, p. 2534-2545

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Opinion: Advocating for science progress as a human right

    Mann, Sebastian Porsdam, Donders, Y., Mitchell, C., Bradley, V. J., Chou, M. F., Mann, Matthias, Church, G. & Porsdam, Helle, 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 43, p. 10820-10823 4 p.

    Research output: Contribution to journalComment/debateCommunication

  10. Published

    Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis

    Krahmer, N., Najafi, B., Schueder, F., Quagliarini, F., Steger, M., Seitz, S., Kasper, R., Salinas, F., Cox, J., Uhlenhaut, N. H., Walther, T. C., Jungmann, R., Zeigerer, A., Borner, G. H. H. & Mann, Matthias, 2018, In : Developmental Cell. 47, 2, p. 205-221.E7

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    PKD Phosphorylation as Novel Pathway of KV11.1 Regulation

    Steffensen, Annette Buur, Bomholtz, S. H., Andersen, M. N., Olsen, Jesper Velgaard, Mutsaers, N., Lundegaard, Pia Rengtved, Lundby, Alicia & Schmitt, Nicole, 2018, In : Cellular Physiology and Biochemistry. 47, 4, p. 1742-1750 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Palaeoproteomic Profiling of Conservation Layers on a 14th Century Italian Wall Painting

    Mackie, Meaghan, Rüther, Patrick, Samodova, Diana, Di Gianvincenzo, Fabiana, Granzotto, C., Lyon, D., Peggie, D. A., Howard, H., Harrison, L., Jensen, Lars Juhl, Olsen, Jesper Velgaard & Cappellini, Enrico, 2018, In : Angewandte Chemie (International ed. in English). 57, 25, p. 7369-7374 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Plasma Proteome Profiling Reveals Dynamics of Inflammatory and Lipid Homeostasis Markers after Roux-En-Y Gastric Bypass Surgery

    Albrechtsen, Nicolai Jacob Wewer, Geyer, P. E., Doll, S., Treit, P. V., Bojsen-Møller, K. N., Martinussen, C., Jørgensen, N. B., Torekov, Signe Sørensen, Meier, F., Niu, Lili, Santos, A., Keilhauer, E. C., Holst, Jens Juul, Madsbad, Sten & Mann, Matthias, 2018, In : Cell Systems. 7, 6, p. 601-612

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Polyester based nanovehicles for siRNA delivery

    Xu, Z., Wang, Danyang, Cheng, Y., Yang, Mingshi & Wu, L., 2018, In : Materials Science and Engineering C: Materials for Biological Applications. 92, p. 1006-1015 10 p.

    Research output: Contribution to journalReviewResearchpeer-review

  15. Published

    Protective role of the vulture facial skin and gut microbiomes aid adaptation to scavenging

    Zepeda Mendoza, M. L., Roggenbuck, M., Manzano Vargas, K., Hansen, L. H., Brunak, Søren, Gilbert, M Thomas P & Sicheritz-Pontén, Thomas, 2018, In : Acta Veterinaria Scandinavica. 60, 1, p. 1-19 19 p., 61.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Proteomic evidence of dietary sources in ancient dental calculus

    Hendy, J., Warinner, C., Bouwman, A., Collins, Matthew James, Fiddyment, S., Fischer, R., Hagan, R., Hofman, C. A., Holst, M., Chaves, E., Klaus, L., Larson, G., Mackie, Meaghan, McGrath, K., Mundorff, A. Z., Radini, A., Rao, H., Trachsel, C., Velsko, I. M. & Speller, C. F., 2018, In : Proceedings of the Royal Society B: Biological Sciences. 285, 1883, 977.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Proteomics Analysis of Skeletal Muscle from Leptin-Deficient ob/ob Mice Reveals Adaptive Remodeling of Metabolic Characteristics and Fiber Type Composition

    Schönke, M., Björnholm, M., Chibalin, A. V., Zierath, Juleen R & Deshmukh, Atul Shahaji, 2018, In : Proteomics. 18, 5-6, p. 1-11 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Proteomics for blood biomarker exploration of severe mental illness: pitfalls of the past and potential for the future

    Comes, A. L., Papiol, S., Mueller, T., Geyer, P. E., Mann, Matthias & Schulze, T. G., 2018, In : Translational Psychiatry. 8, p. 1-15 15 p., 160.

    Research output: Contribution to journalReviewResearchpeer-review

  19. Published

    Proteomics in the Study of Liver Diseases

    Niu, Lili, Geyer, P. E. & Mann, Matthias, 2018, The Human Gut-Liver-Axis in Health and Disease. Krag, A. & Hansen, T. (eds.). Springer, p. 165-193

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  20. Published

    Quality control for plasma and cerebrospinal fluid samples using mass spectrometry

    Skotte, N. H., Geyer, P. E., Steger, M., Treit, P. V., Voytik, E., Hellem, M. N., Nielsen, Jørgen Erik & Mann, Matthias, 2018, In : Journal of Neurology, Neurosurgery and Psychiatry. 89, p. A31-A32

    Research output: Contribution to journalConference abstract in journalResearch

  21. Published

    Quantitative Proteomic Analysis Reveals Synaptic Dysfunction in the Amygdala of Rats Susceptible to Chronic Mild Stress

    Zhou, M., Liu, Z., Yu, J., Li, S., Tang, M., Zeng, L., Wang, H., Xie, H., Peng, L., Huang, H., Zhou, C., Xie, P. & Zhou, J., 2018, In : Neuroscience. 376, p. 24-39 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Quantitative metaproteomics of medieval dental calculus reveals individual oral health status

    Jersie-Christensen, R. R., Lanigan, Liam Thomas, Lyon, D., Mackie, Meaghan, Belstrøm, Daniel, Kelstrup, C. D., Fotaki, Anna Katerina, Willerslev, Eske, Lynnerup, Niels, Jensen, Lars Juhl, Cappellini, Enrico & Olsen, Jesper Velgaard, 2018, In : Nature Communications. 9, p. 1-12 4744.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Rapid proteomic analysis for solid tumors reveals LSD1 as a drug target in an end-stage cancer patient

    Doll, S., Kriegmair, M. C., Santos, A., Wierer, M., Coscia, Fabian, Neil, Helen, Porubsky, S., Geyer, P. E., Mund, Andreas, Nuhn, P. & Mann, Matthias, 2018, In : Molecular Oncology. 12, 8, p. 1296-1307 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Rare truncating variants in the sarcomeric protein titin associate with familial and early-onset atrial fibrillation

    Ahlberg, G., Refsgaard, L., Lundegaard, Pia Rengtved, Andreasen, L., Ranthe, M. F., Linscheid, N., Nielsen, J. B., Melbye, Mads, Haunsø, Stig, Sajadieh, Ahmad, Camp, L., Olesen, Søren-Peter, Rasmussen, Simon, Lundby, Alicia, Ellinor, P. T., Holst, A. G., Svendsen, Jesper Hastrup & Olesen, Morten Steen Salling, 2018, In : Nature Communications. 9, 1, 11 p., 4316.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Regulation of eukaryotic elongation factor 1 alpha (eEF1A) by dynamic lysine methylation

    Jakobsson, M. E., Małecki, J. & Falnes, P. Ø., 2018, In : RNA biology. 15, 3, p. 314-319 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Retinoic Acid Signaling in Thymic Epithelial Cells Regulates Thymopoiesis

    Wendland, K., Niss, Kristoffer, Kotarsky, K., Wu, N. Y. H., White, A. J., Jendholm, L. J., Rivollier, A., Izarzugaza, J. M. G., Brunak, Søren, Holländer, G. A., Anderson, G., Sitnik, K. M. & Agace, W. W., 2018, In : Journal of Immunology. 201, 2, p. 524-532 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    SPOP promotes transcriptional expression of DNA repair and replication factors to prevent replication stress and genomic instability

    Hjorth-Jensen, K., Maya-Mendoza, A., Dalgaard, Nanna, Sigurðsson, J. O., Bartek, J., Iglesias Gato, Diego, Olsen, Jesper Velgaard & Flores-Morales, A., 2018, In : Nucleic Acids Research. 46, 18, p. 9484-9495

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    SPOP promotes transcriptional expression of DNA repair and replication factors to prevent replication stress and genomic instability (vol 46, pg 9484, 2018)

    Hjorth-Jensen, K., Maya-Mendoza, A., Dalgaard, Nanna, Sigurosson, J. O., Bartek, J., Iglesias Gato, Diego, Olsen, Jesper Velgaard & Flores-Morales, A., 2018, In : Nucleic Acids Symposium Series. 46, 18, p. 9891-9891

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    STK3 is a therapeutic target for a subset of acute myeloid leukemias

    Camgoz, A., Paszkowski-Rogacz, M., Satpathy, S., Wermke, M., Hamann, M. V., von Bonin, M., Choudhary, Chuna Ram, Knapp, S. & Buchholz, F., 2018, In : OncoTarget. 9, 39, p. 25458-25473 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Site-specific characterization of endogenous SUMOylation across species and organs

    Hendriks, Ivo Alexander, Lyon, D., Su, D., Skotte, Niels Henning, Daniel, J. A., Jensen, Lars Juhl & Nielsen, Michael Lund, 2018, In : Nature Communications. 9, p. 1-17 2456.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation

    Buch-Larsen, Sara Charlotte, Hendriks, Ivo Alexander, Lyon, D., Jensen, Lars Juhl & Nielsen, Michael Lund, 2018, In : Cell Reports. 24, 9, p. 2493-2505

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    TISSUES 2.0: an integrative web resource on mammalian tissue expression

    Palasca, O., Santos, A., Stolte, C., Gorodkin, Jan & Jensen, Lars Juhl, 2018, In : Database. 2018, 1, p. 1-12

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide

    Anupama, J., Francescatto, M., Rahman, F., Fatima, N., DeBlasio, D., Shanmugam, A. K., Satagopam, V., Santos, A., Kolekar, P., Michaut, M. & Guney, E., 2018, In : PLOS Computational Biology. 14, 1, p. 1-12 e1005802.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    The Interplay of Non-coding RNAs and X Chromosome Inactivation in Human Disease

    Russo, Francesco, De Masi, F., Brunak, Søren & Belling, Kirstine G, 2018, Systems Biology. Rajewsky, N., Jurga, S. & Barciszewski, J. (eds.). Springer, p. 229-238 (RNA Technologies).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  35. Published

    The closed form of Mad2 is bound to Mad1 and Cdc20 at unattached kinetochores

    Zhang, G. & Nilsson, Jakob, 2018, In : Cell Cycle. 17, 9, p. 1087-1091

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    The dual methyltransferase METTL13 targets N terminus and Lys55 of eEF1A and modulates codon-specific translation rates

    Jakobsson, M. E., Małecki, J. M., Halabelian, L., Nilges, B. S., Pinto, R., Kudithipudi, S., Munk, S., Davydova, E., Zuhairi, F. R., Arrowsmith, C. H., Jeltsch, A., Leidel, S. A., Olsen, Jesper Velgaard & Falnes, P. Ø., 2018, In : Nature Communications. 9, 1, 3411.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    The governance structure for data access in the DIRECT consortium: an innovative medicines initiative (IMI) project

    Teare, H. J. A., de Masi, F., Banasik, Karina, Barnett, A., Herrgard, S., Jablonka, B., Postma, J. W. M., McDonald, T. J., Forgie, I., Chmura, P. J., Rydzka, E. K., Gupta, R., Brunak, Søren, Pearson, E. & Kaye, J., 2018, In : Life Sciences, Society and Policy. 14, 1, p. 1-17 20.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    The protein kinase SIK downregulates the polarity protein Par3

    Vanlandewijck, M., Dadras, M. S., Lomnytska, M., Mahzabin, T., Miller, M. L., Busch, C., Brunak, Søren, Heldin, C. & Moustakas, A., 2018, In : OncoTarget. 9, 5, p. 5716-5735 20 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    The proteome of prostate cancer bone metastasis reveals heterogeneity with prognostic implications

    Iglesias Gato, Diego, Thysell, E., Tyanova, S., Crnalic, S., Santos, A., Lima, T. S., Geiger, T., Cox, J., Widmark, A., Bergh, A., Mann, Matthias, Flores-Morales, A. & Wikström, P., 2018, In : Clinical Cancer Research. 24, 21, p. 5433-5444 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Time-Resolved Analysis Reveals Rapid Dynamics and Broad Scope of the CBP/p300 Acetylome

    Weinert, B. T., Narita, Takeo, Satpathy, S., Srinivasan, Balaji, Hansen, B. K., Schölz, C., Hamilton, William, Zucconi, B. E., Wang, W. W., Liu, W. R., Brickman, Joshua Mark, Kesicki, E. A., Lai, A., Bromberg, K. D., Cole, P. A. & Choudhary, Chuna Ram, 2018, In : Cell. 174, 1, p. 231-244.e12 27 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Toppar: an interactive browser for viewing association study results

    Juliusdottir, T., Banasik, Karina, Robertson, N. R., Mott, R. & McCarthy, M. I., 2018, In : Bioinformatics. 34, 11, p. 1922-1924 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Tousled-like kinases stabilize replication forks and show synthetic lethality with checkpoint and PARP inhibitors

    Lee, S., Segura-Bayona, S., Villamor-Payà, M., Saredi, G., Todd, Matthew, Attolini, C. S., Chang, T., Stracker, T. H. & Groth, Anja, 2018, In : Science Advances. 4, 8, p. 1-14 14 p., eaat4985.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Towards a coordination of European activities to diagnose and manage insect diseases in production facilities

    Eilenberg, Jørgen, van Oers, M. M., Jensen, A. B., Lecocq, Antoine, Maciel Vergara, Gabriela, Andrade Santacoloma, L. P., van Loon, J. J. A. & Hesketh, H., 2018, In : Journal of Insects as Food and Feed. 4, 3, p. 157-166 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Toxicogenomics directory of rat hepatotoxicants in vivo and in cultivated hepatocytes

    Grinberg, M., Stöber, R. M., Albrecht, W., Edlund, K., Schug, M., Godoy, P., Cadenas, C., Marchan, R., Lampen, A., Braeuning, A., Buhrke, T., Leist, M., Oberemm, A., Hellwig, B., Kamp, H., Gardner, I., Escher, S., Taboureau, Olivier Thierry, Aguayo Orozco, Alejandro, Sachinidis, A., Ellinger-Ziegelbauer, H., Rahnenführer, J. & Hengstler, J. G., 2018, In : Archives of Toxicology. 92, 12, p. 3517-3533 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Transcriptome analysis of the adult human Klinefelter testis and cellularity-matched controls reveals disturbed differentiation of Sertoli- and Leydig cells

    Winge, S. B., Dalgaard, M. D., Belling, Kirstine G, Jensen, J. M., Nielsen, J. E., Aksglaede, L., Schierup, M. H., Brunak, Søren, Skakkebæk, Niels Erik, Juul, Anders, Rajpert-De Meyts, E. & Almstrup, K., 2018, In : Cell Death & Disease. 9, 6, 14 p., 586.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Truncated SALL1 Impedes Primary Cilia Function in Townes-Brocks Syndrome

    Bozal-Basterra, L., Martín-Ruíz, I., Pirone, L., Liang, Y., Sigurðsson, J. O., Gonzalez-Santamarta, M., Giordano, I., Gabicagogeascoa, E., de Luca, A., Rodríguez, J. A., Wilkie, A. O. M., Kohlhase, J., Eastwood, D., Yale, C., Olsen, Jesper Velgaard, Rauchman, M., Anderson, K. V., Sutherland, J. D. & Barrio, R., 2018, In : American Journal of Human Genetics. 102, 2, p. 249-265 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    UbiSite approach for comprehensive mapping of lysine and N-terminal ubiquitination sites

    Akimov, V., Barrio-Hernandez, I., Hansen, S. V. F., Hallenborg, P., Pedersen, A., Bekker-Jensen, D. B., Puglia, M., Christensen, S. D. K., Vanselow, J. T., Nielsen, M. M., Kratchmarova, I., Kelstrup, C. D., Olsen, Jesper Velgaard & Blagoev, B., 2018, In : Nature Structural & Molecular Biology. 25, p. 631-640 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Understanding the indirect DNA read-out specificity of I-CreI Meganuclease

    Prieto, J., Redondo, P., López-Méndez, B., D'Abramo, M., Merino, N., Blanco, F. J., Duchateau, P., Montoya, Guillermo & Molina, Rafael, 2018, In : Scientific Reports. 8, p. 1-9 10286.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Unexplored therapeutic opportunities in the human genome

    Oprea, T. I., Bologa, C. G., Brunak, Søren, Campbell, A., Gan, G. N., Gaulton, A., Gomez, S. M., Guha, R., Hersey, A., Holmes, J., Jadhav, A., Jensen, Lars Juhl, Johnson, G. L., Karlson, A., Leach, A. R., Ma'ayan, A., Malovannaya, A., Mani, S., Mathias, S. L., McManus, M. T., Meehan, T. F., von Mering, C., Muthas, D., Nguyen, D., Overington, J. P., Papadatos, G., Qin, J., Reich, C., Roth, B. L., Schürer, S. C., Simeonov, A., Sklar, L. A., Southall, N., Tomita, S., Tudose, I., Ursu, O., Vidovic, D., Waller, A., Westergaard, David, Yang, J. J. & Zahoránszky-Köhalmi, G., 2018, In : Nature Reviews. Drug Discovery. 17, 5, p. 317-332 16 p.

    Research output: Contribution to journalReviewResearchpeer-review

  50. Published

    Viruses.STRING: A Virus-Host Protein-Protein Interaction Database

    Cook, H. V., Doncheva, Nadezhda Tsankova, Szklarczyk, D., von Mering, C. & Jensen, Lars Juhl, 2018, In : Viruses. 10, 10, p. 1-11 519.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    ZUFSP Deubiquitylates K63-Linked Polyubiquitin Chains to Promote Genome Stability

    Haahr, Peter Thorlund, Borgermann, N., Guo, X., Typas, Dimitris, Achuthankutty, D., Hoffmann, Saskia, Shearer, Robert Francis, Sixma, T. K. & Mailand, Niels, 2018, In : Molecular Cell. 70, 1, p. 165-174

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    p38-MK2 signaling axis regulates RNA metabolism after UV-light-induced DNA damage

    Borisova, M. E., Voigt, A., Tollenaere, M. A. X., Sahu, S. K., Juretschke, T., Kreim, N., Mailand, Niels, Choudhary, Chuna Ram, Bekker-Jensen, Simon Holst, Akutsu, M., Wagner, S. A. & Beli, P., 2018, In : Nature Communications. 9, p. 1-16 16 p., 1017.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. 2017
  54. Published

    lncRNA Panct1 Maintains Mouse Embryonic Stem Cell Identity by Regulating TOBF1 Recruitment to Oct-Sox Sequences in Early G1

    Chakraborty, D., Paszkowski-Rogacz, M., Berger, N., Ding, L., Mircetic, J., Fu, J., Iesmantavicius, V., Choudhary, Chuna Ram, Anastassiadis, K., Stewart, A. F. & Buchholz, F., 12 Dec 2017, In : Cell Reports. 21, 11, p. 3012-3021 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Structure and dynamics of mesophilic variants from the homing endonuclease I-DmoI

    Alba, J., Marcaida, M. J., Prieto, J., Montoya, Guillermo, Molina, Rafael & D'Abramo, M., Dec 2017, In : Journal of Computer - Aided Molecular Design. 31, 12, p. 1063-1072 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. Published

    Region and cell-type resolved quantitative proteomic map of the human heart

    Doll, S., Dreßen, M., Geyer, P. E., Itzhak, D. N., Braun, C., Doppler, S. A., Meier, F., Deutsch, M., Lahm, H., Lange, R., Krane, M. & Mann, Matthias, 13 Nov 2017, In : Nature Communications. 8, 1, 13 p., 1469.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Redox-sensitive alteration of replisome architecture safeguards genome integrity

    Somyajit, Kumar, Gupta, R., Sedlackova, Hana, Neelsen, K. J., Ochs, F., Rask, M., Choudhary, Chuna Ram & Lukas, Jiri, 10 Nov 2017, In : Science. 358, 6364, p. 797-802 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    Drug target ontology to classify and integrate drug discovery data

    Lin, Y., Mehta, S., Küçük-McGinty, H., Turner, J. P., Vidovic, D., Forlin, M., Koleti, A., Nguyen, D., Jensen, Lars Juhl, Guha, R., Mathias, S. L., Ursu, O., Stathias, V., Duan, J., Nabizadeh, N., Chung, C., Mader, C., Visser, U., Yang, J. J., Bologa, C. G., Oprea, T. I. & Schürer, S. C., 9 Nov 2017, In : Journal of Biomedical Semantics. 8, 1, 16 p., 50.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    A Primer on Concepts and Applications of Proteomics in Neuroscience

    Hosp, F. & Mann, Matthias, 1 Nov 2017, In : Neuron. 96, 3, p. 558-571 14 p.

    Research output: Contribution to journalReviewResearchpeer-review

  60. Published

    Adverse outcome pathways: opportunities, limitations and open questions

    Leist, M., Ghallab, A., Graepel, R., Marchan, R., Hassan, R., Bennekou, S. H., Limonciel, A., Vinken, M., Schildknecht, S., Waldmann, T., Danen, E., van Ravenzwaay, B., Kamp, H., Gardner, I., Godoy, P., Bois, F. Y., Braeuning, A., Reif, R., Oesch, F., Drasdo, D., Höhme, S., Schwarz, M., Hartung, T., Braunbeck, T., Beltman, J., Vrieling, H., Sanz, F., Forsby, A., Gadaleta, D., Fisher, C., Kelm, J., Fluri, D., Ecker, G., Zdrazil, B., Terron, A., Jennings, P., van der Burg, B., Dooley, S., Meijer, A. H., Willighagen, E., Martens, M., Evelo, C., Mombelli, E., Taboureau, Olivier Thierry, Mantovani, A., Hardy, B., Koch, B., Escher, S., van Thriel, C., Cadenas, C., Kroese, D., van de Water, B. & Hengstler, J. G., Nov 2017, In : Archives of Toxicology. 91, 11, p. 3477-3505 29 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    Circulating Glucagon 1-61 Regulates Blood Glucose by Increasing Insulin Secretion and Hepatic Glucose Production

    Albrechtsen, Nicolai Jacob Wewer, Kuhre, Rune Ehrenreich, Hornburg, D., Jensen, C. Z., Hornum, Mads, Dirksen, C., Svane, M., Gasbjerg, Lærke Smidt, Jorgensen, N. B., Gabe, Maria Buur Nordskov, Balk-Moller, E., Albrechtsen, Reidar, Winther-Sørensen, Marie, Galsgaard, Katrine Douglas, Meissner, F., Jorsal, T., Lund, A., Vilsbøll, Tina, Eliasen, R., Bojsen-Moller, K. N., Idorn, T., Deacon, Carolyn F., Knop, Filip Krag, Rosenkilde, Mette, Hartmann, Bolette, Feldt-Rasmussen, Bo, Mann, Matthias, Madsbad, Sten & Holst, Jens Juul, Nov 2017, In : Cell Reports. 21, 6, p. 1452-1460

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Class 2 CRISPR-Cas RNA-guided endonucleases: Swiss Army knives of genome editing

    Stella, Stefano, Alcón, P. & Montoya, Guillermo, Nov 2017, In : Nature Structural and Molecular Biology. 24, 11, p. 882-892 11 p.

    Research output: Contribution to journalReviewResearchpeer-review

  63. Published

    Protein features as determinants of wild-type glycoside hydrolase thermostability

    Geertz-Hansen, H. M., Kiemer, L., Nielsen, M., Stanchev, K., Blom, N., Brunak, Søren & Petersen, T. N., Nov 2017, In : Proteins: Structure, Function, and Bioinformatics. 85, 11, p. 2036-2044 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    RADX interacts with single-stranded DNA to promote replication fork stability

    Schubert, Lisa, Ho, T., Hoffmann, Saskia, Haahr, Peter Thorlund, Guérillon, C. & Mailand, Niels, Nov 2017, In : EMBO Reports. 18, 11, p. 1991-2003 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    PTIP chromatin regulator controls development and activation of B cell subsets to license humoral immunity in mice

    Su, D., Vanhee, S., Soria, R., Gyllenbäck, E. J., Starnes, L. M., Højfeldt, M. K., Pedersen, G. K., Yuan, J. & Daniel, J. A., 31 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 44, p. E9328-E9337 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    Allosteric regulation of Csx1, a type IIIB-associated CARF domain ribonuclease by RNAs carrying a tetraadenylate tail

    Han, W., Pan, S., López-Méndez, B., Montoya, Guillermo & She, Q., 13 Oct 2017, In : Nucleic Acids Research. 45, 18, p. 10740-10750 11 p., gkx726.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. Published

    Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours

    Lasko, L. M., Jakob, C. G., Edalji, R. P., Qiu, W., Montgomery, D., Digiammarino, E. L., Hansen, T. M., Risi, R. M., Frey, R., Manaves, V., Shaw, B., Algire, M., Hessler, P., Lam, L. T., Uziel, T., Faivre, E., Ferguson, D., Buchanan, F. G., Martin, R. L., Torrent, M., Chiang, G. G., Karukurichi, K., Langston, J. W., Weinert, B. T., Choudhary, Chuna Ram, de Vries, P., Van Drie, J. H., McElligott, D., Kesicki, E., Marmorstein, R., Sun, C., Cole, P. A., Rosenberg, S. H., Michaelides, M. R., Lai, A. & Bromberg, K. D., 5 Oct 2017, In : Nature. 550, 7674, p. 128-132 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Progressive resistance training in head and neck cancer patients undergoing concomitant chemoradiotherapy

    Lonkvist, C. K., Vinther, A., Zerahn, B., Rosenbom, E., Deshmukh, Atul Shahaji, Hojman, P. & Gehl, Julie, Oct 2017, In : Laryngoscope Investigative Otolaryngology. 2, 5, p. 295-306 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Why is it so difficult to measure glucagon-like peptide-1 in a mouse?

    Windeløv, Johanne Agerlin, Albrechtsen, Nicolai Jacob Wewer, Kuhre, Rune Ehrenreich, Jepsen, Sara Lind, Hornburg, D., Pedersen, J., Jensen, E. P., Galsgaard, Katrine Douglas, Winther-Sørensen, Marie, Ørgaard, A., Deacon, Carolyn F., Mann, Matthias, Kissow, Hannelouise, Hartmann, Bolette & Holst, Jens Juul, Oct 2017, In : Diabetologia. 60, 10, p. 2066-2075 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Revisiting biomarker discovery by plasma proteomics

    Geyer, P. E., Holdt, L. M., Teupser, D. & Mann, Matthias, 26 Sep 2017, In : Molecular Systems Biology. 13, 9, 16 p., 942.

    Research output: Contribution to journalReviewResearchpeer-review

  71. Published

    Assembly and analysis of 100 full MHC haplotypes from the Danish population

    Jensen, J. M., Villesen, P., Friborg, R. M., Mailund, T., Besenbacher, S., Sørensen, L. M., Petersen, Bent, Sibbesen, J. A., Liu, S., Skov, L., Belling, Kirstine G, Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R., Ye, W., Rao, J., Guo, X., Sun, J., Cao, H., Ye, C., Beusekom, J. V., Espeseth, T., Flindt, E., Halager, A. E., Hellard, S. L., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, D., Yadav, R., Li, N., Xu, X., Hansen, Torben, Bolund, L., Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., Sep 2017, In : Genome Research. 27, 9, p. 1597-1607 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    Synthetic lethality between murine DNA repair factors XLF and DNA-PKcs is rescued by inactivation of Ku70

    Xing, M., Bjørås, M., Daniel, J. A., Alt, F. W. & Oksenych, V., Sep 2017, In : DNA Repair. 57, p. 133-138 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    TIN-X: target importance and novelty explorer

    Cannon, D. C., Yang, J. J., Mathias, S. L., Ursu, O., Mani, S., Waller, A., Schürer, S. C., Jensen, Lars Juhl, Sklar, L. A., Bologa, C. G. & Oprea, T. I., 15 Aug 2017, In : Bioinformatics. 33, 16, p. 2601-2603 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Localization of PP2A-B56 to centromeres in Drosophila

    Hertz, Emil Peter Thrane & Nilsson, Jakob, 3 Aug 2017, In : Cell Cycle. 16, 15, p. 1385-1386 2 p.

    Research output: Contribution to journalEditorialResearchpeer-review

  75. Published

    Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper

    Huerta-Cepas, J., Forslund, K., Coelho, L. P., Szklarczyk, D., Jensen, Lars Juhl, von Mering, C. & Bork, P., 1 Aug 2017, In : Molecular Biology and Evolution. 34, 8, p. 2115-2122 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Cylindromatosis Tumor Suppressor Protein (CYLD) Deubiquitinase is Necessary for Proper Ubiquitination and Degradation of the Epidermal Growth Factor Receptor

    Sanchez-Quiles, V., Akimov, V., Osinalde, N., Francavilla, C., Puglia, M., Barrio-Hernandez, I., Kratchmarova, I., Olsen, Jesper Velgaard & Blagoev, B., Aug 2017, In : Molecular and Cellular Proteomics. 16, 8, p. 1433-1446 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Assembly of Francisella novicida Cpf1 endonuclease in complex with guide RNA and target DNA

    Alcón, P., Montoya, Guillermo & Stella, Stefano, 1 Jul 2017, In : Acta Crystallographica Section F: Structural Biology Communications. 73, Pt 7, p. 409-415 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Structure of the Cpf1 endonuclease R-loop complex after target DNA cleavage

    Stella, Stefano, Alcón, P. & Montoya, Guillermo, 22 Jun 2017, In : Nature. 546, 7659, p. 559-563 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  79. Published

    Replication Catastrophe: When a Checkpoint Fails because of Exhaustion

    Toledo Lazaro, Luis Ignacio, Neelsen, K. J. & Lukas, Jiri, 15 Jun 2017, In : Molecular Cell. 66, 6, p. 735-749 15 p.

    Research output: Contribution to journalReviewResearchpeer-review

  80. Published

    Bub1 positions Mad1 close to KNL1 MELT repeats to promote checkpoint signalling

    Zhang, G., Kruse, Thomas, López-Méndez, B., Sylvestersen, K. B., Garvanska, Dimitriya Hristoforova, Schopper, S., Nielsen, Michael Lund & Nilsson, Jakob, 12 Jun 2017, In : Nature Communications. 8, 12 p., 15822.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Published

    Complete Mapping of Complex Disulfide Patterns with Closely-Spaced Cysteines by In-Source Reduction and Data-Dependent Mass Spectrometry

    Cramer, C. N., Kelstrup, C. D., Olsen, Jesper Velgaard, Haselmann, K. F. & Nielsen, P. K., 6 Jun 2017, In : Analytical Chemistry. 89, 11, p. 5949-5957 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Improved Reversed Phase Chromatography of Hydrophilic Peptides from Spatial and Temporal Changes in Column Temperature

    Young, C., Podtelejnikov, A. V. & Nielsen, Michael Lund, 2 Jun 2017, In : Journal of Proteome Research. 16, 6, p. 2307-2317 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Proteomic profiling of archaeological human bone

    Sawafuji, R., Cappellini, Enrico, Nagaoka, T., Fotaki, Anna Katerina, Jersie-Christensen, R. R., Olsen, Jesper Velgaard, Hirata, K. & Ueda, S., Jun 2017, In : Royal Society Open Science. 4, 6, 12 p., 161004.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Published

    Corrigendum: Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

    Forslund, K., Hildebrand, F., Nielsen, Trine, Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, Mani, Kristiansen, Karsten, Voigt, A. Y., drb459, drb459, Hercog, R., Costea, P. I., Kultima, J. R., Li, J., Jørgensen, T., Levenez, F., Doré, J., Nielsen, H. B., Brunak, Søren, Raes, J., Hansen, Torben, Wang, J., Ehrlich, S. D., Bork, P., Pedersen, Oluf Borbye & MetaHIT consortium, M. C., 3 May 2017, In : Nature. 545, 116, 1 p., 22318.

    Research output: Contribution to journalComment/debateResearch

  85. Published

    Comparison of global gene expression profiles of microdissected human foetal Leydig cells with their normal and hyperplastic adult equivalents

    Lottrup, G., Belling, Kirstine G, Leffers, H., Nielsen, J. E., Dalgaard, M. D., Juul, Anders, Skakkebæk, Niels Erik, Brunak, Søren & Meyts, E. R., 1 May 2017, In : Molecular Human Reproduction. 23, 5, p. 339-354 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  86. Published

    Accurate quantification of site-specific acetylation stoichiometry reveals the impact of sirtuin deacetylase CobB on the E. coli acetylome

    Weinert, B. T., Satpathy, S., Hansen, B. K., Lyon, D., Jensen, Lars Juhl & Choudhary, Chuna Ram, May 2017, In : Molecular and Cellular Proteomics. 16, p. 759-769

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Klinefelter syndrome comorbidities linked to increased X chromosome gene dosage and altered protein interactome activity

    Belling, Kirstine G, Russo, Francesco, Jensen, A. B., Dalgaard, M. D., Westergaard, David, Rajpert-De Meyts, E., Skakkebæk, Niels Erik, Juul, Anders & Brunak, Søren, 1 Apr 2017, In : Human Molecular Genetics. 26, 7, p. 1219-1229 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Loss-less Nano-fractionator for High Sensitivity, High Coverage Proteomics

    Kulak, N. A., Geyer, P. E. & Mann, Matthias, Apr 2017, In : Molecular and Cellular Proteomics. 16, 4, p. 694-705 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. Published

    Phosphoproteomics of Primary Cells Reveals Druggable Kinase Signatures in Ovarian Cancer

    Francavilla, C., Lupia, M., Tsafou, K., Villa, A., Kowalczyk, K., Rakownikow Jersie-Christensen, R., Bertalot, G., Confalonieri, S., Brunak, Søren, Jensen, Lars Juhl, Cavallaro, U. & Olsen, Jesper Velgaard, 28 Mar 2017, In : Cell Reports. 18, 13, p. 3242-3256 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Chromosome-wise Protein Interaction Patterns and Their Impact on Functional Implications of Large-Scale Genomic Aberrations

    Kirk, I. K., Weinhold, N., Belling, Kirstine G, Skakkebæk, Niels Erik, Jensen, T. S., Leffers, H., Juul, Anders & Brunak, Søren, 22 Mar 2017, In : Cell Systems. 4, 3, 11 p., 357-364.e3.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    DEK is required for homologous recombination repair of DNA breaks

    Smith, E. A., Gole, B., Willis, N. A., Soria, R., Starnes, L. M., Krumpelbeck, E. F., Jegga, A. G., Ali, A. M., Guo, H., Meetei, A. R., Andreassen, P. R., Kappes, F., Vinnedge, L. M. P., Daniel, J. A., Scully, R., Wiesmüller, L. & Wells, S. I., 20 Mar 2017, In : Scientific Reports. 7, 12 p., 44662.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    A novel humanized mouse model of Huntington disease for preclinical development of therapeutics targeting mutant huntingtin alleles

    Southwell, A. L., Skotte, Niels Henning, Villanueva, Erika Bianca, Østergaard, M. E., Gu, X., Kordasiewicz, H. B., Kay, C., Cheung, D., Xie, Y., Waltl, S., Dal Cengio, L., Findlay-Black, H., Doty, C. N., Petoukhov, E., Iworima, D., Slama, R., Ooi, J., Pouladi, M. A., Yang, X. W., Swayze, E. E., Seth, P. P. & Hayden, M. R., 15 Mar 2017, In : Human Molecular Genetics. 26, 6, p. 1115-1132 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Early differences in islets from prediabetic NOD mice: combined microarray and proteomic analysis

    Crèvecoeur, I., Gudmundsdottir, V., Vig, S., Marques Câmara Sodré, F., D'Hertog, W., Fierro, A. C., Van Lommel, L., Gysemans, C., Marchal, K., Waelkens, E., Schuit, F., Brunak, Søren, Overbergh, L. & Mathieu, C., Mar 2017, In : Diabetologia. 60, 3, p. 475-489 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation

    Hendriks, Ivo Alexander, Lyon, D., Young, C., Jensen, Lars Juhl, Vertegaal, A. C. O. & Nielsen, Michael Lund, Mar 2017, In : Nature Structural and Molecular Biology. 24, 3, p. 325-336 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    miRNAs in Human Subcutaneous Adipose Tissue: Effects of Weight Loss Induced by Hypocaloric Diet and Exercise

    Kristensen, M. M., Davidsen, P. K., Vigelso, A., Hansen, C. N., Jensen, Lars Juhl, Jessen, N., Bruun, Jens Meldgaard, Dela, Flemming & Helge, Jørn Wulff, Mar 2017, In : Obesity. 25, 3, p. 572-580 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Cutavirus in cutaneous malignant melanoma

    Mollerup, S., Fridholm, E. M. H., Vinner, Lasse, Kjartansdóttir, K. R., Friis-Nielsen, J., Asplund, M., Romero Herrera, Jose Alejandro, Steiniche, T., Mourier, T., Brunak, Søren, Willerslev, Eske, Izarzugaza, J. M. G., Hansen, Anders Johannes & Nielsen, L. P., Feb 2017, In : Emerging Infectious Diseases . 23, 2, p. 363-365 3 p.

    Research output: Contribution to journalLetterResearchpeer-review

  97. Published

    Genetic determinants of serum vitamin B12 and their relation to body mass index

    Allin, Kristine Højgaard, Friedrich, N., Pietzner, M., Grarup, Niels, Thuesen, B. H., Linneberg, Allan René, Pisinger, Charlotta Holm, Hansen, Torben, Pedersen, Oluf Borbye & Sandholt, C. H., Feb 2017, In : European Journal of Epidemiology. 32, 2, p. 125–134

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    Proteomics insights into DNA damage response and translating this knowledge to clinical strategies

    von Stechow, L. & Olsen, Jesper Velgaard, Feb 2017, In : Proteomics. 17, 3-4, 15 p., 1600018.

    Research output: Contribution to journalReviewResearchpeer-review

  99. Published

    Nomenclature for alleles of the human carboxylesterase 1 gene

    INDICES Consortium, I. C., 1 Jan 2017, In : Pharmacogenetics and Genomics. 27, 2, p. 78-80 3 p.

    Research output: Contribution to journalComment/debateResearchpeer-review

  100. Published

    A scored human protein-protein interaction network to catalyze genomic interpretation

    Li, T., Wernersson, R., Hansen, R. B., Horn, H., Mercer, J., Slodkowicz, G., Workman, C. T., Rigina, O., Rapacki, K., Stærfeldt, H. H., Brunak, Søren, Jensen, T. S. & Hansen, K. L., Jan 2017, In : Nature Methods. 14, 1, p. 61–64

    Research output: Contribution to journalLetterResearchpeer-review

  101. Published

    Combinatorial Drug Screening Identifies Ewing Sarcoma–specific Sensitivities

    Radic-Sarikas, B., Tsafou, K. P., Emdal, Kristina Bennet, Papamarkou, T., Huber, K. V. M., Mutz, C., Toretsky, J. A., Bennett, K. L., Olsen, Jesper Velgaard, Brunak, S., Kovar, H. & Superti-Furga, G., Jan 2017, In : Molecular Cancer Therapeutics. 16, 1, p. 88-101 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. Published

    Pharos: Collating protein information to shed light on the druggable genome

    Nguyen, D., Mathias, S., Bologa, C., Brunak, Søren, Fernandez, N., Gaulton, A., Hersey, A., Holmes, J., Jensen, Lars Juhl, Karlsson, A., Liu, G., Ma'ayan, A., Mandava, G., Mani, S., Mehta, S., Overington, J., Patel, J., Rouillard, A. D., Schürer, S., Sheils, T., Simeonov, A., Sklar, L. A., Southall, N., Ursu, O., Vidovic, D., Waller, A., Yang, J., Jadhav, A., Oprea, T. I. & Guha, R., Jan 2017, In : Nucleic Acids Research. 45, D1, p. D995–D1002

    Research output: Contribution to journalJournal articleResearchpeer-review

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