The NNF Center for Protein Research

  1. Published

    The association between anxiety and measures of glycaemia in a population-based diabetes screening programme

    Aujla, N., Davies, Michael Jonathan, Skinner, Timothy, Gray, L. J., Webb, D. R., Srinivasan, Balaji & Khunti, K., 1 Jul 2011, In : Diabetic Medicine. 28, 7, p. 785-788 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    A novel LC system embeds analytes in pre-formed gradients for rapid, ultra-robust proteomics

    Bache, N., Geyer, P. E., Bekker-Jensen, D. B., Hørning, O., Falkenby, L., Treit, P. V., Doll, S., Paron, I., Müller, J. B., Meier, F., Olsen, Jesper Velgaard, Vorm, O. & Mann, Matthias, 2018, In : Molecular and Cellular Proteomics. 17, 11, p. 2284-2296 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Sensitive quantitation of endotoxin by enzyme-linked immunosorbent assay with monoclonal antibody against Limulus peptide C

    Baek, L., Buchardt, O. & Nielsen, Peter E., Feb 1994, In : Journal of Clinical Microbiology. 32, 2, p. 416-22 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    A new method for discovering disease-specific MiRNA-target regulatory networks

    Baglioni, M., Russo, Francesco, Geraci, F., Rizzo, M., Rainaldi, G. & Pellegrini, M., 7 Apr 2015, In : PLoS ONE. 10, 4, e0122473.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Spatio-temporal profiling and degradation of alpha-amylase isozymes during barley seed germination

    Bak-Jensen, K. S., Laugesen, S., Østergaard, Ole, Finnie, C., Roepstorff, P. & Svensson, B., May 2007, In : F E B S Journal. 274, 10, p. 2552-65 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Bioinformatics-driven identification and examination of candidate genes for non-alcoholic fatty liver disease

    Banasik, Karina, Justesen, Johanne Marie, Hornbak, M., Krarup, N. T., Gjesing, Anette Marianne Prior, Sandholt, C. H., Søndergaard Jensen, T., Grarup, Niels, Andersson, Å., Jørgensen, T., Witte, D. R., Sandbæk, A., Lauritzen, T., Thorens, B., Brunak, Søren, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye & Hansen, Torben, 1 Jan 2011, In : P L o S One. 6, 1, p. e16542

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Gibberellic acid-induced aleurone layers responding to heat shock or tunicamycin provide insight into the N-glycoproteome, protein secretion, and endoplasmic reticulum stress

    Barba-Espín, G., Dedvisitsakul, P., Hägglund, Per Mårten, Svensson, B. & Finnie, C., 1 Feb 2014, In : Plant Physiology. 164, 2, p. 951-965 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    A chromatin-based signalling mechanism directs the switch from mutagenic to error-free repair of DNA double strand breaks

    Bartke, T. & Groth, Anja, 2019, In : Molecular & Cellular Oncology. 6, 4, 3 p., 1605820.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Mass Spectrometry of Human Leukocyte Antigen Class I Peptidomes Reveals Strong Effects of Protein Abundance and Turnover on Antigen Presentation

    Bassani-Sternberg, M., Pletscher-Frankild, S., Jensen, Lars Juhl & Mann, Matthias, Mar 2015, In : Molecular and Cellular Proteomics. 14, 3, p. 658-73 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Consistent Prediction of Mutation Effect on Drug Binding in HIV-1 Protease Using Alchemical Calculations

    Bastys, T., Gapsys, V., Doncheva, Nadezhda Tsankova, Kaiser, R., De Groot, B. L. & Kalinina, O. V., 10 Jul 2018, In : Journal of Chemical Theory and Computation. 14, 7, p. 3397-3408

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Off-Line High-pH Reversed-Phase Fractionation for In-Depth Phosphoproteomics

    Batth, Tanveer Singh, Francavilla, C. & Olsen, Jesper Velgaard, 4 Nov 2014, In : Journal of Proteome Research. 13, 12, p. 6176-86 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins

    Batth, Tanveer Singh, Singh, P., Ramakrishnan, V. R., Sousa, M. M. L., Chan, L. J. G., Tran, H. M., Luning, E. G., Pan, E. H. Y., Vuu, K. M., Keasling, J. D., Adams, P. D. & Petzold, C. J., Nov 2014, In : Metabolic Engineering. 26, p. 48-56 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Offline High pH Reversed-Phase Peptide Fractionation for Deep Phosphoproteome Coverage

    Batth, Tanveer Singh & Olsen, Jesper Velgaard, 2016, Phospho-Proteomics: Methods and Protocols. Stechow, L. V. (ed.). Springer, Vol. 1355. p. 179-92 14 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  14. Published

    Large-Scale Phosphoproteomics Reveals Shp-2 Phosphatase-Dependent Regulators of Pdgf Receptor Signaling

    Batth, Tanveer Singh, Papetti, M., Pfeiffer, Anamarija, Tollenaere, M. A. X., Francavilla, C. & Olsen, Jesper Velgaard, 2018, In : Cell Reports. 22, 10, p. 2784-2796 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Protein aggregation capture on microparticles enables multi-purpose proteomics sample preparation

    Batth, Tanveer Singh, Tollenaere, M. A. X., Rüther, Patrick, Gonzalez-Franquesa, Alba, Prabhakar, B. S., Bekker-Jensen, Simon Holst, Deshmukh, Atul Shahaji & Olsen, Jesper Velgaard, 2019, In : Molecular and Cellular Proteomics. 18, 5, p. 1027-1035

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Half-Life Extending Modifications of Peptide YY3-36 Direct Receptor-Mediated Internalization

    Bech, E. M., Kaiser, A., Bellmann-Sickert, K., Bohr, Søren Schmidt-Rasmussen, Sørensen, K. K., Elster, L., Hatzakis, Nikos, Pedersen, S. L., Beck-Sickinger, A. G. & Jensen, Knud Jørgen, 2019, In : Molecular Pharmaceutics. 16, 8, p. 3665-3677

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Acetyltransferases Gcn5 and PCAF regulate B cell development

    Beck, C., Daniel, J. & Oksenych, V., 2019, In : Scandinavian Journal of Immunology. 90, 6

    Research output: Contribution to journalConference abstract in journalResearch

  18. Published

    Diagnosis trajectories of prior multi-morbidity predict sepsis mortality

    zmw894, zmw894, Jensen, A. B., Nielsen, Annelaura Bach, Perner, Anders, Moseley, Pope Lloyd & Brunak, Søren, 4 Nov 2016, In : Scientific Reports. 6, 9 p., 36624.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    TEMPORAL ORDER OF DISEASE PAIRS AFFECTS SUBSEQUENT DISEASE TRAJECTORIES: THE CASE OF DIABETES AND SLEEP APNEA

    zmw894, zmw894, Westergaard, David, Jensen, A. B., Groop, L. & Brunak, Søren, 2016, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 22, p. 380-389 10 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  20. Published

    Knowledge engineering for health: a new discipline required to bridge the "ICT gap" between research and healthcare

    Beck, T., Gollapudi, S., Brunak, Søren, Graf, N., Lemke, H. U., Dash, D., Buchan, I., Díaz, C., Sanz, F. & Brookes, A. J., May 2012, In : Human Mutation. 33, 5, p. 797-802 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Combined GLP-1, Oxyntomodulin, and Peptide YY Improves Body Weight and Glycemia in Obesity and Prediabetes/Type 2 Diabetes: A Randomized Single-Blinded Placebo Controlled Study

    Behary, P., Tharakan, G., Alexiadou, K., Johnson, N., Albrechtsen, Nicolai Jacob Wewer, Kenkre, J., Cuenco, J., Hope, D., Anyiam, O., Choudhury, S., Alessimii, H., Poddar, A., Minnion, J., Doyle, C., Frost, G., Le Roux, C., Purkayastha, S., Moorthy, K., Dhillo, W., Holst, Jens Juul, Ahmed, A. R., Prevost, A. T., Bloom, S. R. & Tan, T. M., 2019, In : Diabetes Care. 42, 7, 8 p., dc190449.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    A urokinase receptor-associated protein with specific collagen binding properties

    Behrendt, Niels, Jensen, O. N., Engelholm, Lars Henning, Mørtz, E., Mann, Matthias & Danø, K., 21 Jan 2000, In : The Journal of Biological Chemistry. 275, 3, p. 1993-2002 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Identification of a novel membrane protein that interacts specifically with the upar-prourokinase complex

    Behrendt, Niels, Engelholm, Lars Henning, Jensen, O. N., Mörtz, E., Ranne, E., Mann, Matthias & Dan, K., 1 Dec 1997, In : Fibrinolysis and Proteolysis. 11, SUPPL. 3, 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes

    Bekker-Jensen, D. B., Kelstrup, C. D., Batth, Tanveer Singh, Buch-Larsen, Sara Charlotte, Haldrup, C., Bramsen, J. B., Sørensen, K. D., Høyer, S., Ørntoft, T. F., Andersen, C. L., Nielsen, Michael Lund & Olsen, Jesper Velgaard, 2017, In : Cell Systems. 4, 6, p. 587-599, e1-e4 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients

    Bekker-Jensen, D. B., Martínez-Val, A., Steigerwald, S., Rüther, Patrick, Fort, K. L., Arrey, T. N., Harder, A., Makarov, A. & Olsen, Jesper Velgaard, Apr 2020, In : Molecular and Cellular Proteomics. 19, 4, p. 716-729 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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